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Protein Overview: Rip11-PA

General Information:
Name(s) found: Rip11-PA / FBpp0074387 [FlyBase]
Description(s) found:
Found 20 descriptions.
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  • The gene Rab11 interacting protein is referred to in FlyBase by the symbol Dmel\Rip11 (CG6606, FBgn0027335). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is X:18529675..18541596. It has the cytological map location 17C6-17C7. Its molecular function is unknown. There is experimental evidence that it is involved in the biological process</span>: rhabdomere development. 32 alleles are reported. The phenotypes of these alleles are annotated with: pupa; rhabdomere; eye photoreceptor cell. It has 2 annotated transcripts and 2 annotated polypeptides. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 832 amino acids

    Gene Ontology:
    Cellular Component: intracellular membrane-bounded organelle [IEA]
    Biological Process: rhabdomere development [IMP]
    protein transport [IEA]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWSPTHCSVT VQRARGLLTK GKNGTNNCFV TIALGKEKYQ TSVKDKAETS VNWNEECELK  60
   61 IPDQGNRAEL TLTCLHRNNL GIDEFLGQAT LPLNEMDVYD RPRAKWFKLE SKPGKEKKNK 120
  121 ERGELEVRIA FVVKSGSLTD LSKKDKHKSS IGQLASSVGG SLLSIGNGEK RRGIKKLAGS 180
  181 LSSKLHIRSK KKNQEAGADD SSSFGGSFAS LGTPNSSNGR GQNGGSGRRR GGQRAGEADP 240
  241 GVISEDEDEF VFDNLSHKSS GSSLNIQRIG LQPPPVGTPN FTPRHPSPLL NNGVSGVGSG 300
  301 SAKGKQAVLP ATLDEDASID AEMEQLELDF SVRAHARANA NASASGNAST LPPPSKPPRI 360
  361 PLSQVDEQPA AGSLEREKPK EKPAEVESDK DEWASKLYGG GKYLEIGSSN SLKRRSWEDR 420
  421 VPLPASVEEP PPLHSSSSSS SSSSDSDDDD EKPPQAAPPP VPVPASLPVP SAAASTASAD 480
  481 PVVATSSSLF SPDVEHRNFD TFNASFAKYE QRNSTAIFAD EPELEDLTVE LEKPAPTPTA 540
  541 RPKPQPRATA DLRAEEEKAK EEAARQLRAE EDARLEAELR LNEERLREEE EAMQRELEEE 600
  601 KERQKQLQMD EQQRREAKRW EEDQRLLSFA KRSTSLEEPV PEKQELKHER ELVAKQEPEK 660
  661 TLDTAEPEPE HNFLTPEQSP KEFQTNGSGS GSGERWEKRL GKFKYGNKRD KYNNDNDSNS 720
  721 PSPKSTERII IGHEKSGSHA DRRSEISAQL AKKYEGKSRE ELMLIANGME NEALLQRQRV 780
  781 KELEDYLDNL LLRVMETHPK ILQNPYSRTT SAKRYGTWSF WSSSRTRATP TH

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..174] PSI-BLAST 32.0 Synaptogamin I
    2 View Details [175..270] deduced N/A No confident structure predictions are available.
    3 View Details [271..342] deduced N/A No confident structure predictions are available.
    4 View Details [343..476] deduced N/A No confident structure predictions are available.
    5 View Details [477..832] PSI-BLAST 15.221849 Heavy meromyosin subfragment


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle