| Protein: | Rip11-PA |
| Organism: | Drosophila melanogaster |
| Length: | 832 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Rip11-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
207.0 | [0..113] | [831..1029] |
|
Region A: Residues: [1-174] |
1 11 21 31 41 51
| | | | | |
1 MWSPTHCSVT VQRARGLLTK GKNGTNNCFV TIALGKEKYQ TSVKDKAETS VNWNEECELK 60
61 IPDQGNRAEL TLTCLHRNNL GIDEFLGQAT LPLNEMDVYD RPRAKWFKLE SKPGKEKKNK 120
121 ERGELEVRIA FVVKSGSLTD LSKKDKHKSS IGQLASSVGG SLLSIGNGEK RRGI
|
| Detection Method: |  |
| Confidence: | 32.0 |
| Match: | 1dqvA |
| Description: | Synaptogamin I |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [175-270] |
1 11 21 31 41 51
| | | | | |
1 KKLAGSLSSK LHIRSKKKNQ EAGADDSSSF GGSFASLGTP NSSNGRGQNG GSGRRRGGQR 60
61 AGEADPGVIS EDEDEFVFDN LSHKSSGSSL NIQRIG
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [271-342] |
1 11 21 31 41 51
| | | | | |
1 LQPPPVGTPN FTPRHPSPLL NNGVSGVGSG SAKGKQAVLP ATLDEDASID AEMEQLELDF 60
61 SVRAHARANA NA
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [343-476] |
1 11 21 31 41 51
| | | | | |
1 SASGNASTLP PPSKPPRIPL SQVDEQPAAG SLEREKPKEK PAEVESDKDE WASKLYGGGK 60
61 YLEIGSSNSL KRRSWEDRVP LPASVEEPPP LHSSSSSSSS SSDSDDDDEK PPQAAPPPVP 120
121 VPASLPVPSA AAST
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [477-832] |
1 11 21 31 41 51
| | | | | |
1 ASADPVVATS SSLFSPDVEH RNFDTFNASF AKYEQRNSTA IFADEPELED LTVELEKPAP 60
61 TPTARPKPQP RATADLRAEE EKAKEEAARQ LRAEEDARLE AELRLNEERL REEEEAMQRE 120
121 LEEEKERQKQ LQMDEQQRRE AKRWEEDQRL LSFAKRSTSL EEPVPEKQEL KHERELVAKQ 180
181 EPEKTLDTAE PEPEHNFLTP EQSPKEFQTN GSGSGSGERW EKRLGKFKYG NKRDKYNNDN 240
241 DSNSPSPKST ERIIIGHEKS GSHADRRSEI SAQLAKKYEG KSREELMLIA NGMENEALLQ 300
301 RQRVKELEDY LDNLLLRVME THPKILQNPY SRTTSAKRYG TWSFWSSSRT RATPTH
|
| Detection Method: | |
| Confidence: | 15.221849 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
