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Protein Overview: FBpp0302022, FBp...

General Information:
Name(s) found: FBpp0309640 [FlyBase]
FBpp0302022 [FlyBase]
FBpp0302020 [FlyBase]
FBpp0302019 [FlyBase]
Description(s) found:
Found 44 descriptions.
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  • type=protein; loc=X:complement(17352254..17354476,17354537..17355231,17355295..17356156,17357626..17357853,17357909..17358277); ID=FBpp0309640; name=CG43658-PH; parent=FBgn0263706,FBtr0342803; dbxref=FlyBase:FBpp0309640,FlyBase_Annotation_IDs:CG43658-PH; MD5=782e42131e755a127d478b4b4b7130e7; length=1458; release=r5.56; species=Dmel; [FlyBase]
  • type=protein; loc=X:complement(17352254..17354476,17354537..17355231,17355295..17356156,17357626..17357853,17357909..17358277); ID=FBpp0302022; name=CG43658-PE; parent=FBgn0263706,FBtr0310339; dbxref=FlyBase_Annotation_IDs:CG43658-PE,FlyBase:FBpp0302022,REFSEQ:NP_001259644,GB_protein:AGB95486; MD5=782e42131e755a127d478b4b4b7130e7; length=1458; release=r5.56; species=Dmel; [FlyBase]
  • type=protein; loc=X:complement(17352254..17354476,17354537..17355231,17355295..17356156,17357626..17357853,17357909..17358277); ID=FBpp0302020; name=CG43658-PB; parent=FBgn0263706,FBtr0310337; dbxref=FlyBase:FBpp0302020,FlyBase_Annotation_IDs:CG43658-PB,REFSEQ:NP_788924,GB_protein:AAO41695; MD5=782e42131e755a127d478b4b4b7130e7; length=1458; release=r5.56; species=Dmel; [FlyBase]
  • type=protein; loc=X:complement(17352254..17354476,17354537..17355231,17355295..17356156,17357626..17357853,17357909..17358277); ID=FBpp0302019; name=CG43658-PA; parent=FBgn0263706,FBtr0310336; dbxref=FlyBase:FBpp0302019,FlyBase_Annotation_IDs:CG43658-PA,REFSEQ:NP_573218,GB_protein:AAF48732; MD5=782e42131e755a127d478b4b4b7130e7; length=1458; release=r5.56; species=Dmel; [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 1458 amino acids

    Gene Ontology:
    Cellular Component: intracellular [IEA]
    Biological Process: regulation of Rho protein signal transduction [IEA]
    Molecular Function: Rho guanyl-nucleotide exchange factor activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIMRRASACT MPSSGGGGGA GVGSSQREEA TTPGESPGGR LSRWFSIRRG SSHQYDVGGR  60
   61 DGRHSTASSF DTPDSGSGNS PKNGSNAVAG TGGAGSQGVA LDAASPQKLA NLGASKMMPG 120
  121 VPESEDDEAT ANRFDVDLMM TPGSRANGTA RTAHNRLIVP MLPPAPAGLS QQQLKRRHIV 180
  181 AAIVHSENSY VATLQRLVND YKKPLEECSP PVLNPVKIAT LFHCLPDILH SHKLFRISLA 240
  241 ECVRNWDRDE KIGDCFVSAF GKPQLLEIYS GFINNFSAAM ELAKMEEKRK SALADFFKVK 300
  301 QISAHDRLSF FGLMVKPVQR FPQFILFLQD LLKYTPQGHH DRMSLQLALS QLELLAELLN 360
  361 ESKREAEQYQ AFKEMLGHIS GTFNARSLSL SSVSVSDSAG GHRPRYLLRE DNVTHMEFNQ 420
  421 AGFIVKCKQR RLLLLNDKVI CVSVAPKQSH DFGATEKLTF KWMFPVNDVE IVDNSTSATL 480
  481 SRILTAGLNR GGSLKSNGSS GANGSPYANS TLPGHGGGVS GFSGFGDPHS SPAAQLTNGA 540
  541 DNLCSEMSTL MYDYEVISRI QDLVSSLKGS YKELNANTTR NVLNLIQGSI QRKDEEMAWV 600
  601 DSCCLQLIGR HKSGKEETFT FQTQTPAVKK EWITELRLAQ LALDPNNSPA WERGGSHPQP 660
  661 AHHHPHHHPL QHPHAGAGDP RQTQEQLQLQ EAVQQKQSRK MPLFVKAMPV YKSQHQTEVR 720
  721 CGCYYSIAND TKQSGNARRR HKQLNYLWMC SSDGTSSHIT VLAQHPQQAG NLREAGAFDL 780
  781 FETQVSALEF VKGLDQLKSR DEPASLLGDL VWLGTDSRKI LIYSARNPEQ EEQLGSYSVP 840
  841 GAVQRILYHF DAVYVALSGA TVLIFRRGND GVWQLRDPQT IRLGDTDLVV PSLLPINMCI 900
  901 YASCGNRVYV MNALNGEIQR SFEVQHGATQ QVNLMAHSGI GLWISLKNST MLCLYHTETF 960
  961 KHLQDINIAS SVLRHDGKKE QPLNNSSVYV TALMACKGLL WVGTNVGIAV TIPLPRLEGV1020
 1021 PIISGGINMS CHAHFGPITF LLPLIPKVYP AYKPPTVGAA PLVPSMGDDL QLPAIDADPK1080
 1081 IQELDDGAVV LRRDLAKEEM SSSNPGADST ASSPRSSKLD KQNSLDQSFT AKIRASLANS1140
 1141 PAFHRKRFRD DPNRMSKTLP RGLGAAAAGS GAGGASAAGS GTASGNTSQH GEHGICDVYG1200
 1201 LYGKLIFVKE DYDAEEGNQG NLMDMMYEGM RRSDPELAAI PGKVCTLDRR LRMKASRPRS1260
 1261 LDLSNWSVDS KSSSLYTSSG SEESMGIRHF GGRSVSRNSS SASHKTSGTG SDLGNISENG1320
 1321 LMTTADIHHH QQQQQQLNSS AKPDEMSRLG AGNSGLDKPA AAVATLKRKQ KQNSKQQQQQ1380
 1381 NADGPRTVIT LMGGRGYWRQ MWYNGAGGSP SHKNSSSGGG GGSGSGFSGQ TMQSGNPSCS1440
 1441 PLTANSNDAH IVVWEKKL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..169] deduced N/A No confident structure predictions are available.
    2 View Details [170..685] PSI-BLAST 39.39794 Crystal structure of the DH-PH-cat module of Son of Sevenless (SOS)
    3 View Details [686..1085] PSI-BLAST 40.221849 F-box/WD-repeat protein 1 (beta-TRCP1)
    4 View Details [1086..1170] PSI-BLAST 38.69897 PAF-AH Holoenzyme: Lis1/Alfa2
    5 View Details [1171..1458] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  0.597587183571285 bayes_pls_golite062009
  • guanyl-nucleotide exchange factor activity
    		•  0.43111420227783 bayes_pls_golite062009
  • protein binding
    		•  0.29116370406325 bayes_pls_golite062009
    3 No functions predicted.
    4 No functions predicted.
    5 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
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