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Protein Overview: FBpp0309958, FBp...

General Information:
Name(s) found: FBpp0311353 [FlyBase]
FBpp0309958 [FlyBase]
FBpp0309957 [FlyBase]
RpS5a-PA / FBpp0074180 [FlyBase]
Description(s) found:
Found 42 descriptions.
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  • type=protein; loc=X:complement(17037736..17037804,17038651..17038749,17039049..17039165,17040831..17041232); ID=FBpp0311353; name=RpS5a-PD; parent=FBgn0002590,FBtr0345132; dbxref=FlyBase:FBpp0311353,FlyBase_Annotation_IDs:CG8922-PD; MD5=353104e218fcc6d4b660d1bd47016c81; length=228; release=r5.56; species=Dmel; [FlyBase]
  • type=protein; loc=X:complement(17037736..17037804,17038651..17038749,17039049..17039165,17040831..17041232); ID=FBpp0309958; name=RpS5a-PC; parent=FBgn0002590,FBtr0343293; dbxref=FlyBase:FBpp0309958,FlyBase_Annotation_IDs:CG8922-PC; MD5=353104e218fcc6d4b660d1bd47016c81; length=228; release=r5.56; species=Dmel; [FlyBase]
  • type=protein; loc=X:complement(17037736..17037804,17038651..17038749,17039049..17039165,17040831..17041232); ID=FBpp0309957; name=RpS5a-PB; parent=FBgn0002590,FBtr0343292; dbxref=FlyBase:FBpp0309957,FlyBase_Annotation_IDs:CG8922-PB; MD5=353104e218fcc6d4b660d1bd47016c81; length=228; release=r5.56; species=Dmel; [FlyBase]
  • The gene Ribosomal protein S5a is referred to in FlyBase by the symbol Dmel\RpS5a (CG8922, FBgn0002590). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is X:17037620..17042287. It has the cytological map location 15E5-15E7. Based on sequence similarity, it is predicted to have molecular function</span>: structural constituent of ribosome. There is experimental evidence that it is involved in the biological process</span>: mitotic spindle elongation; mitotic spindle organization. 10 alleles are reported. The phenotype of these alleles is annotated with: macrochaeta. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 228 amino acids

    Gene Ontology:
    Cellular Component: cytosolic small ribosomal subunit [ISS][NAS]
    ribosome [NAS]
    Biological Process: mitotic spindle elongation [IMP]
    mitotic spindle organization [IMP]
    translation [ISS][NAS]
    Molecular Function: RNA binding [IEA]
    structural constituent of ribosome [ISS][NAS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEVAENVVE TFEEPAAPME AEVAETILET NVVSTTELPE IKLFGRWSCD DVTVNDISLQ  60
   61 DYISVKEKFA RYLPHSAGRY AAKRFRKAQC PIVERLTCSL MMKGRNNGKK LMACRIVKHS 120
  121 FEIIHLLTGE NPLQILVSAI INSGPREDST RIGRAGTVRR QAVDVSPLRR VNQAIWLLCT 180
  181 GAREAAFRNI KTIAECLADE LINAAKGSSN SYAIKKKDEL ERVAKSNR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..75] FFAS03 2.12 Ribosomal protein S7
    2 View Details [76..228] PSI-BLAST 45.154902 Structure of the ribosomal 80S-eEF2-sordarin complex from yeast obtained by docking atomic models for RNA and protein components into a 11.7 A cryo-EM map. This file, 1S1H, Contains 40S subunit. The 60S Ribosomal Subunit Is In File 1S1I.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle