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Protein Overview: Or13a-PA

General Information:
Name(s) found: Or13a-PA / FBpp0073938 [FlyBase]
Description(s) found:
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  • gi|24642365|ref|NP_523359.2| odorant receptor 13a [Drosophila melanogaster] [NCBI NR]
  • gi|22832321|gb|AAF48549.2| odorant receptor 13a [Drosophila melanogaster] [NCBI NR]
  • gi|14285650|sp|Q9VXL0.2|OR13A_DROME RecName: Full=Putative odorant receptor 13a [NCBI NR]
  • (Q9VXL0) Putative odorant receptor 13a [Swiss-Prot]
  • Odorant receptor 13a OS=Drosophila melanogaster GN=Or13a PE=2 SV=2 [Swiss-Prot]
  • The gene Odorant receptor 13a is referred to in FlyBase by the symbol Dmel\Or13a (CG12697, FBgn0030715). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is X:15868458..15870739. It has the cytological map location 14A4. Based on sequence similarity, it is predicted to have molecular function</span>: olfactory receptor activity. Based on sequence similarity, it is predicted to be involved in the biological process</span>: sensory perception of smell. 2 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
  • >CG12697-PA translation from_gene[CG12697 Or13a FBgn0030715] seq_release:3 mol_weight=48264 cds_boundaries:(X:15,705,440..15,707,718[+]) aa_length:418 transcript_info:[CG12697-RA seq_release:3] gene_info:[gene symbol:Or13a FBgn0030715 gene_boundaries:( [hmr_yeast5_DM3-1_pombe.fasta]
  • CG12697-PA [Drosophila melanogaster]gi|24642365|ref|NP_523359.2| CG12697-PA [Drosophila melanogaster]gi|14285650|sp|Q9VXL0|OR13_DROME Putative odorant receptor 13a [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=X:join(15868458..15868810,15869094..15869525,15870078..15870177,15870239..15870346,15870405..15870593,15870665..15870739); ID=FBpp0073938; name=Or13a-PA; parent=FBgn0030715,FBtr0074133; dbxref=FlyBase:FBpp0073938,FlyBase_Annotation_IDs:C [fly-100309-contam.fasta]
  • Odorant receptor 13a CG12697-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • CG12697-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • Putative odorant receptor 13a [nr-271106-contam.fasta]
  • type=protein; loc=X:join(15868458..15868810,15869094..15869525,15870078..15870177,15870239..15870346,15870405..15870593,15870665..15870739); ID=FBpp0073938; name=Or13a-PA; parent=FBgn0030715,FBtr0074133; dbxref=FlyBase:FBpp0073938,FlyBase_Annotation_IDs:CG12697-PA,GB_protein:AAF48549.2,REFSEQ:NP_523359,GB_protein:AAF48549; MD5=900ea22da883e665e297afb58edfcbf6; length=418; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=X:join(15868458..15868810,15869094..15869525,15870078..15870177,15870239..15870346,15870405..15870593,15870665..15870739); ID=FBpp0073938; name=Or13a-PA; parent=FBgn0030715,FBtr0074133; dbxref=FlyBase:FBpp0073938,FlyBase_Annotation_IDs:CG12697-PA,GB_protein:AAF48549.2,REFSEQ:NP_523359,GB_protein:AAF48549; MD5=900ea22da883e665e297afb58edfcbf6; length=418; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • Putative odorant receptor 13a OS=Drosophila melanogaster GN=Or13a PE=3 SV=2 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=X:join(15868458..15868810,15869094..15869525,15870078..15870177,15870239..15870346,15870405..15870593,15870665..15870739); ID=FBpp0073938; name=Or13a-PA; parent=FBgn0030715,FBtr0074133; dbxref=FlyBase:FBpp0073938,FlyBase_Annotation_IDs:CG12697-PA,GB_protein:AAF48549.2,REFSEQ:NP_523359,GB_protein:AAF48549,FlyMine:FBpp0073938,modMine:FBpp0073938; MD5=900ea22da883e665e297afb58edfcbf6; length=418; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=X:join(15974425..15974777,15975061..15975492,15976045..15976144,15976206..15976313,15976372..15976560,15976632..15976706); ID=FBpp0073938; name=Or13a-PA; parent=FBgn0030715,FBtr0074133; dbxref=FlyBase:FBpp0073938,FlyBase_Annotation_IDs:CG12697-PA,GB_protein:AAF48549.2,REFSEQ:NP_523359,GB_protein:AAF48549,FlyMine:FBpp0073938,modMine:FBpp0073938; MD5=900ea22da883e665e297afb58edfcbf6; length=418; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=X:join(15974425..15974777,15975061..15975492,15976045..15976144,15976206..15976313,15976372..15976560,15976632..15976706); ID=FBpp0073938; name=Or13a-PA; parent=FBgn0030715,FBtr0074133; dbxref=FlyBase:FBpp0073938,FlyBase_Annotation_IDs:CG12697-PA,GB_protein:AAF48549.2,REFSEQ:NP_523359,GB_protein:AAF48549,FlyMine:FBpp0073938,modMine:FBpp0073938; MD5=900ea22da883e665e297afb58edfcbf6; length=418; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • FBpp0073938 type=protein; loc=X:join(15974425..15974777,15975061..15975492,15976045..15976144,15976206..15976313,15976372..15976560,15976632..15976706); ID=FBpp0073938; name=Or13a-PA; parent=FBgn0030715,FBtr0074133; dbxref=FlyBase:FBpp0073938,FlyBase_Annotation_IDs:CG12697-PA,GB_protein:AAF48549.2,REFSEQ:NP_523359,GB_protein:AAF48549,FlyMine:FBpp0073938,modMine:FBpp0073938; MD5=900ea22da883e665e297afb58edfcbf6; length=418; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=X:join(15974425..15974777,15975061..15975492,15976045..15976144,15976206..15976313,15976372..15976560,15976632..15976706); ID=FBpp0073938; name=Or13a-PA; parent=FBgn0030715,FBtr0074133; dbxref=FlyBase:FBpp0073938,FlyBase_Annotation_IDs:CG12697-PA,GB_protein:AAF48549.2,REFSEQ:NP_523359,GB_protein:AAF48549,UniProt/Swiss-Prot:Q9VXL0,FlyMine:FBpp0073938,modMine:FBpp0073938; MD5=900ea22da883e665e297afb58edfcbf6; length=418; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 418 amino acids

    Gene Ontology:
    Cellular Component: membrane [IEA]
    integral to membrane [ISS]
    Biological Process: sensory perception of smell [IEA][ISS]
    Molecular Function: odorant binding [IEA]
    olfactory receptor activity [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFYSYPYKAL SFPIQCVWLK LNGSWPLTES SRPWRSQSLL ATAYIVWAWY VIASVGITIS  60
   61 YQTAFLLNNL SDIIITTENC CTTFMGVLNF VRLIHLRLNQ RKFRQLIENF SYEIWIPNSS 120
  121 KNNVAAECRR RMVTFSIMTS LLACLIIMYC VLPLVEIFFG PAFDAQNKPF PYKMIFPYDA 180
  181 QSSWIRYVMT YIFTSYAGIC VVTTLFAEDT ILGFFITYTC GQFHLLHQRI AGLFAGSNAE 240
  241 LAESIQLERL KRIVEKHNNI ISFAKRLEDF FNPILLANLM ISSVLICMVG FQIVTGKNMF 300
  301 IGDYVKFIIY ISSALSQLYV LCENGDALIK QSTLTAQILY ECQWEGSDRI EIQSFTPTTK 360
  361 RIRNQIWFMI LCSQQPVRIT AFKFSTLSLQ SFTAILSTSI SYFTLLRSVY FDDEKKLD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..235] MSA 1.368994 View MSA. No confident structure predictions are available.
    2 View Details [236..418] MSA 15.378996 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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