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Protein Overview: FBpp0312012, mRp...

General Information:
Name(s) found: FBpp0312012 [FlyBase]
mRpS30-PA / FBpp0073910 [FlyBase]
Description(s) found:
Found 27 descriptions.
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  • type=protein; loc=X:join(15680205..15680662,15680827..15682042); ID=FBpp0312012; name=mRpS30-PB; parent=FBgn0030692,FBtr0346193; dbxref=FlyBase:FBpp0312012,FlyBase_Annotation_IDs:CG8470-PB; MD5=a9eaa0dae44c6da4c9d9bc79c8b41a50; length=557; release=r5.56; species=Dmel; [FlyBase]
  • The gene mitochondrial ribosomal protein S30 is referred to in FlyBase by the symbol Dmel\mRpS30 (CG8470, FBgn0030692). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is X:15680086..15682072. It has the cytological map location 13E18. Based on sequence similarity, it is predicted to have molecular function</span>: structural constituent of ribosome. Based on sequence similarity, it is predicted to be involved in the biological process</span>: translation. 2 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 557 amino acids

    Gene Ontology:
    Cellular Component: mitochondrial small ribosomal subunit [ISS]
    Biological Process: translation [ISS]
    Molecular Function: structural constituent of ribosome [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLKLNRVRHL RTTYKRCLSG QSQLQLNSTD AEPAYPEIQD LSFKARKQKD AANWHEEIRQ  60
   61 VPTVEEKMIK INMPRYYGFK VVDFNDSKIP YNALPLTQHY TRTVLEDLPS ETDKKAQAKD 120
  121 SEQEQEQPSV DGLFKAARGD VIDALEFAHD YYKHLEKQHN SAESNPVERE RILTQIIVEQ 180
  181 LNRALLQSLS EEYKHLDELD VDYNPRHEAF WAVGGVDPPK NVQKSKKGRE WQKDMANESV 240
  241 DRMVQYTGAP YLALRHRKQL TPWKTEAESE NLELSKQLPR FKHDPRTLGY STKHQHATNV 300
  301 PGYWPKGNEN NFGLLSFQSR AHLQIRPKSF GEQDQLEALH SLAIKSSYAW LLAQANYNGF 360
  361 NTYNELTYPM NTQTVITNGR EWSFYEYQLN TLLLHGTNVA ENPRVNFCRG TKPLPLYAEI 420
  421 SASGKCVDFN DNALRHLLNF YANAPSIQRS IGEQQPYVAS DVSAYENAEQ RDFINKTFKY 480
  481 LASNRPRHLE LPEIYLWEKL YKIDNNNRAM EAKRRFFELD INPWQRTLDT HDKEYVPRAV 540
  541 RPDVPKNKNR FKKTYYP

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..305] deduced N/A No confident structure predictions are available.
    2 View Details [306..448] MSA 2.03797 View MSA. No confident structure predictions are available.
    3 View Details [449..557] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.87

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle