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View Structure Prediction Details

Protein: FBpp0312012, mRp...
Organism: Drosophila melanogaster
Length: 557 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0312012, mRp....

Description E-value Query
Range
Subject
Range
gi|54640105, gi|... - gi|54640105|gb|EAL29270.1| GA21100 [Drosophila pseudoobscura pseudoobscura], gi|126002300|ref|XP_001...
gi|126002300|ref... - GA21100-PA [Drosophila pseudoobscura], GA21100 [Drosophila pseudoobscura pseudoobscura]
732.0 [0..1] [557..1]

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Predicted Domain #1
Region A:
Residues: [1-305]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLKLNRVRHL RTTYKRCLSG QSQLQLNSTD AEPAYPEIQD LSFKARKQKD AANWHEEIRQ  60
   61 VPTVEEKMIK INMPRYYGFK VVDFNDSKIP YNALPLTQHY TRTVLEDLPS ETDKKAQAKD 120
  121 SEQEQEQPSV DGLFKAARGD VIDALEFAHD YYKHLEKQHN SAESNPVERE RILTQIIVEQ 180
  181 LNRALLQSLS EEYKHLDELD VDYNPRHEAF WAVGGVDPPK NVQKSKKGRE WQKDMANESV 240
  241 DRMVQYTGAP YLALRHRKQL TPWKTEAESE NLELSKQLPR FKHDPRTLGY STKHQHATNV 300
  301 PGYWP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [306-448]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KGNENNFGLL SFQSRAHLQI RPKSFGEQDQ LEALHSLAIK SSYAWLLAQA NYNGFNTYNE  60
   61 LTYPMNTQTV ITNGREWSFY EYQLNTLLLH GTNVAENPRV NFCRGTKPLP LYAEISASGK 120
  121 CVDFNDNALR HLLNFYANAP SIQ

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [449-557]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RSIGEQQPYV ASDVSAYENA EQRDFINKTF KYLASNRPRH LELPEIYLWE KLYKIDNNNR  60
   61 AMEAKRRFFE LDINPWQRTL DTHDKEYVPR AVRPDVPKNK NRFKKTYYP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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Created and Maintained by: Michael Riffle