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Protein Overview: CG8097-PA, FBpp0...

General Information:
Name(s) found: FBpp0309303 [FlyBase]
CG8097-PA / FBpp0073863 [FlyBase]
Description(s) found:
Found 26 descriptions.
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  • type=protein; loc=X:join(15477495..15478231,15478357..15478672,15478736..15479023); ID=FBpp0309303; name=CG8097-PB; parent=FBgn0030660,FBtr0340344; dbxref=FlyBase:FBpp0309303,FlyBase_Annotation_IDs:CG8097-PB; MD5=efb37318c84b79a39476cccf9b37832c; length=446; release=r5.56; species=Dmel; [FlyBase]
  • This gene is referred to in FlyBase by the symbol Dmel\CG8097 (CG8097, FBgn0030660). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is X:15477194..15479058. It has the cytological map location 13D4. An electronic pipeline based on InterPro domains suggests that it has the molecular function</span>: ATP binding; arginine-tRNA ligase activity. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process</span>: arginyl-tRNA aminoacylation. 5 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 446 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IEA]
    Biological Process: arginyl-tRNA aminoacylation [IEA]
    Molecular Function: ATP binding [IEA]
    arginine-tRNA ligase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDCNPRLQVG QQLFEFFTKP EKPDESGGDV AAPLLLKKFG KLIRYNNDDL TEQGDLTLAA  60
   61 IPRYWQKYLK SQGLKLRIDG DELLPSPVDR LELMEHSRKW RFPLAEITVL NKERYSLRFQ 120
  121 RHPIIAHVLN SVLTLRGDYG RSANNNQSRT ICLQLQAVVG AVDGGQDLRH YRLQQLYKIL 180
  181 LRLVDYSSWR LVEPNDRQKD TICVTVELEK CCNGKQPVEH VCLTCGPVLE PINKGASSLT 240
  241 VDEYLKLRCQ HMELMATQRS GMCPVPMSSL DTLTKRLAAA AVIVDLFVVR HSSAVSVVRN 300
  301 GVGICKGASY ILYNSARLEA LLRKFNYEVN NCAYEKLPLL DEIDLSVLED DVDWELIYGY 360
  361 LLTFPELMES IMDQLDQGHC GLHLLVHYVE NLAAAFSRFY YHKKVLLQKR DELMPILYAR 420
  421 IYLIKAVRQV LNTALAVLGI EPVDYV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..446] PSI-BLAST 105.0 Arginyl-tRNA synthetase (ArgRS); Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.84668360172717 bayes_pls_golite062009
  • ligase activity
    		•  0.41353894226697 bayes_pls_golite062009
  • ligase activity, forming carbon-oxygen bonds
    		•  0.1911539125531 bayes_pls_golite062009
  • ligase activity, forming aminoacyl-tRNA and related compounds
    		•  0.1911539125531 bayes_pls_golite062009
  • aminoacyl-tRNA ligase activity
    		•  0.178548924377401 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle