YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: mRpL38-PA

General Information:
Name(s) found: mRpL38-PA / FBpp0073719 [FlyBase]
Description(s) found:
Found 21 descriptions.
SHOW ALL
  • The gene mitochondrial ribosomal protein L38 is referred to in FlyBase by the symbol Dmel\mRpL38 (CG15871, FBgn0030552). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is X:14120324..14121983. It has the cytological map location 12E5. Based on sequence similarity, it is predicted to have molecular function</span>: phosphatidylethanolamine binding; structural constituent of ribosome. Based on sequence similarity, it is predicted to be involved in the biological process</span>: translation. One allele is reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 416 amino acids

    Gene Ontology:
    Cellular Component: mitochondrial large ribosomal subunit [ISS]
    Biological Process: translation [ISS]
    Molecular Function: phosphatidylethanolamine binding [ISS]
    structural constituent of ribosome [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSFSNLLMKS GLTVAVRDAQ AAVLMTATRQ GHTIRGKPPG VARSLEQRIR EENVEDPEVV  60
   61 ARINIGFPQL KESRSAQLKK RLEHLKSQRS DKQLEQLARS NKLIIDLDKV QRTYVKTTGQ 120
  121 HDLRLVADHY GIFEHLFGSA YFVPRVPLNI SYQLDGDSLA PVYNGNVIKP TEAAKAPQID 180
  181 FDGLVDPITG QAAGQDTYWT LVASNPDAHY TNGTAECLHW FIANIPNGKV SEGQVLAEYL 240
  241 PPFPPRGVGY QRMVFVLYKQ QARLDLGSYQ LAAADYGNLE KRTFSTLDFY RQHQEQLTPA 300
  301 GLAFYQTNWD ESLTQFYHDV LKIKEPVYEY DFPKPYLTDQ KFFPLKQPFN LYMDKHRDQK 360
  361 QVNKEYLERK LAKTHPFEGP KKPLRYPNAH PIRDVPSWLR TEIRKERLGT GRVQDY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..122] deduced N/A No confident structure predictions are available.
    2 View Details [123..333] PSI-BLAST 48.221849 Phosphatidylethanolamine binding protein, PEBP
    3 View Details [334..416] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • structural constituent of ribosome
    		•  5.60349471654541 bayes_pls_golite062009
  • structural molecule activity
    		•  5.28498099874666 bayes_pls_golite062009
  • phosphatidylethanolamine binding
    		•  2.39921319648948 bayes_pls_golite062009
  • binding
    		•  1.8997510034028 bayes_pls_golite062009
  • phospholipid binding
    		•  1.70781158126196 bayes_pls_golite062009
  • lipid binding
    		•  1.58605438198908 bayes_pls_golite062009
  • protein binding
    		•  1.4054795148286 bayes_pls_golite062009
  • receptor binding
    		•  1.09518634969861 bayes_pls_golite062009
  • enzyme inhibitor activity
    		•  0.10294346442997 bayes_pls_golite062009
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle