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Protein Overview: mRpL49-PA, FBpp0...

General Information:
Name(s) found: FBpp0309878 [FlyBase]
mRpL49-PA / FBpp0073524 [FlyBase]
Description(s) found:
Found 28 descriptions.
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  • type=protein; loc=X:join(12801221..12801277,12801342..12801824); ID=FBpp0309878; name=mRpL49-PB; parent=FBgn0030433,FBtr0343185; dbxref=FlyBase:FBpp0309878,FlyBase_Annotation_IDs:CG4647-PB; MD5=5dac931f6ad1c9149c912bc7ea95aab4; length=179; release=r5.56; species=Dmel; [FlyBase]
  • The gene mitochondrial ribosomal protein L49 is referred to in FlyBase by the symbol Dmel\mRpL49 (CG4647, FBgn0030433). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is X:12801139..12801877. It has the cytological map location 11D1. Based on sequence similarity, it is predicted to have molecular function</span>: structural constituent of ribosome. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process</span>: translational initiation. 2 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 179 amino acids

    Gene Ontology:
    Cellular Component: mitochondrial large ribosomal subunit [ISS]
    Biological Process: translational initiation [IEA]
    Molecular Function: translation initiation factor activity [IEA]
    structural constituent of ribosome [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATSAKLMLG SGLCQKLSQL TRQIHMQPAL MSSFRSSREV QELDKYPEVE VVANPPEWRF  60
   61 VERLLPAKTV PQPVEKPKYP SGWQPQKEDG SELGYHVART KNHMVPVYLH TRFRGQRRIT 120
  121 VVRRVQGDIW TLEKDLRAVV EQSRNGKVCA TRINELSGQI HFHGDHVDVL RDYLKEKGF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..66] deduced N/A No confident structure predictions are available.
    2 View Details [67..179] FFAS03 1.23 HUMAN TRANSLATION INITIATION FACTOR EIF1, NMR, 29 STRUCTURES

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  0.603451326978983 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.60

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle