Protein Overview: FBpp0305898, FBp...

General Information:
Name(s) found:	FBpp0311375 [FlyBase] FBpp0305898 [FlyBase] Tis11-PA / FBpp0073516 [FlyBase]
Description(s) found: Found 34 descriptions. SHOW ALL	type=protein; loc=X:join(12554817..12554900,12571770..12572089,12572367..12573273); ID=FBpp0311375; name=Tis11-PD; parent=FBgn0011837,FBtr0345165; dbxref=FlyBase:FBpp0311375,FlyBase_Annotation_IDs:CG4070-PD; MD5=fe28f6c8c22d115a5382bdb3105ab868; length=436; release=r5.56; species=Dmel; [FlyBase] type=protein; loc=X:join(12554817..12554900,12571770..12572089,12572367..12573273); ID=FBpp0305898; name=Tis11-PC; parent=FBgn0011837,FBtr0333756; dbxref=REFSEQ:NP_001259490,GB_protein:AGB95332,FlyBase:FBpp0305898,FlyBase_Annotation_IDs:CG4070-PC; MD5=fe28f6c8c22d115a5382bdb3105ab868; length=436; release=r5.56; species=Dmel; [FlyBase] The gene Tis11 homolog is referred to in FlyBase by the symbol Dmel\Tis11 (CG4070, FBgn0011837). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is X:12553395..12573736. It has the cytological map location 11B9-11B10. It is reported to have molecular function</span>: DNA binding. There is experimental evidence that it is involved in the biological process</span>: RNA interference. 20 alleles are reported. No phenotypic data is available. It has 2 annotated transcripts and 2 annotated polypeptides. [FlyBase]
Organism:	Drosophila melanogaster
Length:	436 amino acids
Gene Ontology:
Cellular Component:	nucleus [NAS]
Biological Process:	RNA interference [IMP]
Molecular Function:	nucleic acid binding [IEA] DNA binding [NAS] zinc ion binding [IEA]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSADILQKSR EQDDSHYFER GDISKYVTMN DHLGDFDCNE VRKEIRMLLA HGANLDQQHQ  60
   61 QQPHRHHGGL TRTISQPAQL IQQQQQQHQQ QQQQQPAVAS LVTITENLGN MNLHRKLERT 120
  121 QSEPLPPQQP MNTSRYKTEL CRPFEEAGEC KYGEKCQFAH GSHELRNVHR HPKYKTEYCR 180
  181 TFHSVGFCPY GPRCHFVHNA DEARAQQAAQ AAKSSTQSQS QSQQSSSQNF SPKSNQSSNQ 240
  241 SSNSSSSSSS SGGGGGGGNS INNNNGSQFY LPLSPPLSMS TGSDRESPTG SLSLSPTNSL 300
  301 TSFPFHDALQ HGYLASNGAK SNSSASSTSS ASGMGLGMSM GIGQGMIIGQ GLGMGHHGPA 360
  361 TPPESPNVPI SPVHTPPPYD VVVSGSGAGN NSVGSKQLLQ KSVSTPMQQE DTPRLPVFNR 420
  421 LSSGVEAYQQ QSNLGL

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..99]	deduced	N/A	No confident structure predictions are available.
2	View Details	[100..190]	PSI-BLAST	24.221849	Structural Basis for Recognition of the mRNA Class II AU-Rich Element by the Tandem Zinc Finger Domain of TIS11d
3	View Details	[191..279]	deduced	N/A	No confident structure predictions are available.
4	View Details	[280..436]	MSA	8.223995	View MSA. No confident structure predictions are available.

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.59

Protein Overview: FBpp0305898, FBp...

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: