| Protein: | FBpp0305898, FBp... |
| Organism: | Drosophila melanogaster |
| Length: | 436 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0305898, FBp....
| Description | E-value | Query Range |
Subject Range |
|
|
262.0 | [0..7] | [431..254] |
|
Region A: Residues: [1-99] |
1 11 21 31 41 51
| | | | | |
1 MSADILQKSR EQDDSHYFER GDISKYVTMN DHLGDFDCNE VRKEIRMLLA HGANLDQQHQ 60
61 QQPHRHHGGL TRTISQPAQL IQQQQQQHQQ QQQQQPAVA
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [100-190] |
1 11 21 31 41 51
| | | | | |
1 SLVTITENLG NMNLHRKLER TQSEPLPPQQ PMNTSRYKTE LCRPFEEAGE CKYGEKCQFA 60
61 HGSHELRNVH RHPKYKTEYC RTFHSVGFCP Y
|
| Detection Method: | |
| Confidence: | 24.221849 |
| Match: | 1rgoA |
| Description: | Structural Basis for Recognition of the mRNA Class II AU-Rich Element by the Tandem Zinc Finger Domain of TIS11d |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [191-279] |
1 11 21 31 41 51
| | | | | |
1 GPRCHFVHNA DEARAQQAAQ AAKSSTQSQS QSQQSSSQNF SPKSNQSSNQ SSNSSSSSSS 60
61 SGGGGGGGNS INNNNGSQFY LPLSPPLSM
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [280-436] |
1 11 21 31 41 51
| | | | | |
1 STGSDRESPT GSLSLSPTNS LTSFPFHDAL QHGYLASNGA KSNSSASSTS SASGMGLGMS 60
61 MGIGQGMIIG QGLGMGHHGP ATPPESPNVP ISPVHTPPPY DVVVSGSGAG NNSVGSKQLL 120
121 QKSVSTPMQQ EDTPRLPVFN RLSSGVEAYQ QQSNLGL
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
