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Protein Overview: ras-PC, FBpp0304...

General Information:
Name(s) found: FBpp0309791 [FlyBase]
FBpp0304573 [FlyBase]
ras-PA / FBpp0071424 [FlyBase]
ras-PC / FBpp0071423 [FlyBase]
Description(s) found:
Found 52 descriptions.
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  • type=protein; loc=X:join(10639853..10640016,10640109..10640259,10640454..10641105,10641519..10642059,10642131..10642236); ID=FBpp0309791; name=ras-PE; parent=FBgn0003204,FBtr0343043; dbxref=FlyBase:FBpp0309791,FlyBase_Annotation_IDs:CG1799-PE; MD5=eebcdaa73bc2923e5b554d8069043c99; length=537; release=r5.56; species=Dmel; [FlyBase]
  • type=protein; loc=X:join(10639853..10640016,10640109..10640259,10640454..10641105,10641519..10642059,10642131..10642236); ID=FBpp0304573; name=ras-PD; parent=FBgn0003204,FBtr0332294; dbxref=REFSEQ:NP_001259427,GB_protein:AGB95270,FlyBase:FBpp0304573,FlyBase_Annotation_IDs:CG1799-PD; MD5=eebcdaa73bc2923e5b554d8069043c99; length=537; release=r5.56; species=Dmel; [FlyBase]
  • The gene raspberry is referred to in FlyBase by the symbol Dmel\ras (CG1799, FBgn0003204). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is X:10638539..10642839. It has the cytological map location 9E1-9E2. Based on sequence similarity, it is predicted to have molecular function</span>: IMP dehydrogenase activity. There is experimental evidence that it is involved in the biological process</span>: axon guidance; phagocytosis, engulfment. 81 alleles are reported. The phenotypes of these alleles are annotated with: macrochaeta; pigment cell. It has 3 annotated transcripts and 3 annotated polypeptides. [FlyBase]
  • The gene raspberry is referred to in FlyBase by the symbol Dmel\ras (CG1799, FBgn0003204). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is X:10638539..10642839. It has the cytological map location 9E1-9E2. Based on sequence similarity, it is predicted to have molecular function</span>: IMP dehydrogenase activity. There is experimental evidence that it is involved in the biological process</span>: axon guidance; phagocytosis, engulfment. 81 alleles are reported. The phenotypes of these alleles are annotated with: macrochaeta; pigment cell. It has 3 annotated transcripts and 3 annotated polypeptides. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 537 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: phagocytosis, engulfment [IMP]
    oogenesis [TAS]
    axon guidance [IMP]
    oxidation reduction [IEA]
    GMP biosynthetic process [NAS]
    Molecular Function: IMP dehydrogenase activity [ISS][NAS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESTTKVKVN GFVESTSSSA APAIQTKSTT GFDAELQDGL SCKELFQNGE GLTYNDFLIL  60
   61 PGYIDFTAEE VDLSSPLTKS LTLRAPLVSS PMDTVTESEM AIAMALCGGI GIIHHNCTPE 120
  121 YQALEVHKVK KYKHGFMRDP SVMSPTNTVG DVLEARRKNG FTGYPVTENG KLGGKLLGMV 180
  181 TSRDIDFREN QPEVLLADIM TTELVTAPNG INLPTANAIL EKSKKGKLPI VNQAGELVAM 240
  241 IARTDLKKAR SYPNASKDSN KQLLVGAAIG TRSEDKARLA LLVANGVDVI ILDSSQGNSV 300
  301 YQVEMIKYIK ETYPELQVIG GNVVTRAQAK NLIDAGVDGL RVGMGSGSIC ITQEVMACGC 360
  361 PQATAVYQVS TYARQFGVPV IADGGIQSIG HIVKAIALGA SAVMMGSLLA GTSEAPGEYF 420
  421 FSDGVRLKKY RGMGSLEAME RGDAKGAAMS RYYHNEMDKM KVAQGVSGSI VDKGSVLRYL 480
  481 PYLECGLQHS CQDIGANSIN KLRDMIYNGQ LRFMKRTHSA QLEGNVHGLF SYEKRLF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..537] PSI-BLAST 106.0 Inosine monophosphate dehydrogenase (IMPDH)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • IMP dehydrogenase activity
    		•  2.02048863053452 bayes_pls_golite062009
  • binding
    		•  0.964202692685807 bayes_pls_golite062009
  • transporter activity
    		•  0.961062314616209 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  0.807029018941177 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  0.640881170978843 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  0.525366315833255 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  0.440262824681055 bayes_pls_golite062009
  • protein binding
    		•  0.22179604283012 bayes_pls_golite062009
  • catalytic activity
    		•  0.181756622780318 bayes_pls_golite062009
  • di-, tri-valent inorganic cation transmembrane transporter activity
    		•  0.0973526732376297 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.86

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle