YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: Obp8a-PA

General Information:
Name(s) found: Obp8a-PA / FBpp0071242 [FlyBase]
Description(s) found:
SHOW ONLY BEST
  • gi|24640769|ref|NP_727322.1| Odorant-binding protein 8a [Drosophila melanogaster] [NCBI NR]
  • gi|22831988|gb|AAF46463.2| Odorant-binding protein 8a [Drosophila melanogaster] [NCBI NR]
  • The gene Odorant-binding protein 8a is referred to in FlyBase by the symbol Dmel\Obp8a (CG12665, FBgn0030103). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is X:9108929..9109735. It has the cytological map location 8D1. Based on sequence similarity, it is predicted to have molecular function</span>: odorant binding. Based on sequence similarity, it is predicted to be involved in the biological process</span>: sensory perception of chemical stimulus. One allele is reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
  • >CG12665-PA translation from_gene[CG12665 Obp8a FBgn0030103] seq_release:3 mol_weight=18433 cds_boundaries:(X:8,953,880..8,954,595[+]) aa_length:163 transcript_info:[CG12665-RA seq_release:3] gene_info:[gene symbol:Obp8a FBgn0030103 gene_boundaries:(X: [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q9W372) CG12665 protein [DrosMelano7227.FASTAC.txt]
  • CG12665-PA [Drosophila melanogaster]gi|24640769|ref|NP_727322.1| CG12665-PA [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=X:join(9108929..9108964,9109192..9109647); ID=FBpp0071242; name=Obp8a-PA; parent=FBgn0030103,FBtr0071307; dbxref=FlyBase:FBpp0071242,FlyBase_Annotation_IDs:CG12665-PA,GB_protein:AAF46463.2,REFSEQ:NP_727322,GB_protein:AAF46463; MD5=9949be [fly-100309-contam.fasta]
  • CG12665-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • Odorant-binding protein 8a CG12665-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=X:join(9108929..9108964,9109192..9109647); ID=FBpp0071242; name=Obp8a-PA; parent=FBgn0030103,FBtr0071307; dbxref=FlyBase:FBpp0071242,FlyBase_Annotation_IDs:CG12665-PA,GB_protein:AAF46463.2,REFSEQ:NP_727322,GB_protein:AAF46463; MD5=9949bea17ed384cf23c354ded4300b2d; length=163; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=X:join(9108929..9108964,9109192..9109647); ID=FBpp0071242; name=Obp8a-PA; parent=FBgn0030103,FBtr0071307; dbxref=FlyBase:FBpp0071242,FlyBase_Annotation_IDs:CG12665-PA,GB_protein:AAF46463.2,REFSEQ:NP_727322,GB_protein:AAF46463; MD5=9949bea17ed384cf23c354ded4300b2d; length=163; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • Odorant binding protein 8a OS=Drosophila melanogaster GN=Obp8a PE=2 SV=2 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=X:join(9108929..9108964,9109192..9109647); ID=FBpp0071242; name=Obp8a-PA; parent=FBgn0030103,FBtr0071307; dbxref=FlyBase:FBpp0071242,FlyBase_Annotation_IDs:CG12665-PA,GB_protein:AAF46463.2,REFSEQ:NP_727322,GB_protein:AAF46463,FlyMine:FBpp0071242,modMine:FBpp0071242; MD5=9949bea17ed384cf23c354ded4300b2d; length=163; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=X:join(9214896..9214931,9215159..9215614); ID=FBpp0071242; name=Obp8a-PA; parent=FBgn0030103,FBtr0071307; dbxref=FlyBase:FBpp0071242,FlyBase_Annotation_IDs:CG12665-PA,GB_protein:AAF46463.2,REFSEQ:NP_727322,GB_protein:AAF46463,FlyMine:FBpp0071242,modMine:FBpp0071242; MD5=9949bea17ed384cf23c354ded4300b2d; length=163; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=X:join(9214896..9214931,9215159..9215614); ID=FBpp0071242; name=Obp8a-PA; parent=FBgn0030103,FBtr0071307; dbxref=FlyBase:FBpp0071242,FlyBase_Annotation_IDs:CG12665-PA,GB_protein:AAF46463.2,REFSEQ:NP_727322,GB_protein:AAF46463,FlyMine:FBpp0071242,modMine:FBpp0071242; MD5=9949bea17ed384cf23c354ded4300b2d; length=163; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • Odorant binding protein 8a OS=Drosophila melanogaster GN=Obp8a PE=4 SV=2 [DROME.fasta.20160308]
  • FBpp0071242 type=protein; loc=X:join(9214896..9214931,9215159..9215614); ID=FBpp0071242; name=Obp8a-PA; parent=FBgn0030103,FBtr0071307; dbxref=FlyBase:FBpp0071242,FlyBase_Annotation_IDs:CG12665-PA,GB_protein:AAF46463.2,REFSEQ:NP_727322,GB_protein:AAF46463,FlyMine:FBpp0071242,modMine:FBpp0071242; MD5=9949bea17ed384cf23c354ded4300b2d; length=163; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=X:join(9214896..9214931,9215159..9215614); ID=FBpp0071242; name=Obp8a-PA; parent=FBgn0030103,FBtr0071307; dbxref=FlyBase:FBpp0071242,FlyBase_Annotation_IDs:CG12665-PA,GB_protein:AAF46463.2,REFSEQ:NP_727322,GB_protein:AAF46463,UniProt/TrEMBL:Q9W372,FlyMine:FBpp0071242,modMine:FBpp0071242; MD5=9949bea17ed384cf23c354ded4300b2d; length=163; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 163 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: sensory perception of chemical stimulus [UNKNOWN]
    transport [IEA]
    Molecular Function: odorant binding [UNKNOWN][IEA][NAS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMRRSQIGLL SRLLLLLLVV ELTPPAIPVP MRSSPQSLAL LRARDQCGRE LTAAQRLQLD  60
   61 RMQFEDAAHV RHYLHCFWSR LQLWLDETGF QAQRIVQSFG GERRLNVEQA LPAINGCNAK 120
  121 TSSRGSGAQT VVDWCFRAFV CVLATPVGEW YKRHMSDVIN GNA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..163] PSI-BLAST 19.30103 AgamOBP1, and odorant binding protein from Anopheles gambiae complexed with PEG


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle