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View Structure Prediction Details

Protein: Obp8a-PA
Organism: Drosophila melanogaster
Length: 163 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Obp8a-PA.

Description E-value Query
Range
Subject
Range
gi|220958606, gi... - gi|220958606|gb|ACL91846.1| Obp99a-PA [synthetic construct], gi|220949486|gb|ACL87286.1| Obp99a-PA [...
Obp99a-PA, FBpp0... - The gene Odorant-binding protein 99a is referred to in FlyBase by the symbol Dmel\Obp99a (CG18111, F...
113.0 [0..15] [153..1]

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Predicted Domain #1
Region A:
Residues: [1-163]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMRRSQIGLL SRLLLLLLVV ELTPPAIPVP MRSSPQSLAL LRARDQCGRE LTAAQRLQLD  60
   61 RMQFEDAAHV RHYLHCFWSR LQLWLDETGF QAQRIVQSFG GERRLNVEQA LPAINGCNAK 120
  121 TSSRGSGAQT VVDWCFRAFV CVLATPVGEW YKRHMSDVIN GNA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 19.30103
Match: 2erbA
Description: AgamOBP1, and odorant binding protein from Anopheles gambiae complexed with PEG
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle