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Protein Overview: FBpp0305662, FBp...

General Information:
Name(s) found: FBpp0305662 [FlyBase]
FBpp0305660 [FlyBase]
mei-P26-PA / FBpp0071238 [FlyBase]
Description(s) found:
Found 35 descriptions.
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  • type=protein; loc=X:join(9060572..9061065,9061191..9063295,9063550..9064018,9064092..9064255,9064337..9064569,9064744..9064848); ID=FBpp0305662; name=mei-P26-PD; parent=FBgn0026206,FBtr0333475; dbxref=REFSEQ:NP_001259378,GB_protein:AGB95221,FlyBase:FBpp0305662,FlyBase_Annotation_IDs:CG12218-PD; MD5=74dd69eee5ecc8f263bf6ff9df5b99df; length=1189; release=r5.56; species=Dmel; [FlyBase]
  • type=protein; loc=X:join(9060572..9061065,9061191..9063295,9063550..9064018,9064092..9064255,9064337..9064569,9064744..9064848); ID=FBpp0305660; name=mei-P26-PB; parent=FBgn0026206,FBtr0333473; dbxref=REFSEQ:NP_001259376,GB_protein:AGB95219,FlyBase:FBpp0305660,FlyBase_Annotation_IDs:CG12218-PB; MD5=74dd69eee5ecc8f263bf6ff9df5b99df; length=1189; release=r5.56; species=Dmel; [FlyBase]
  • The gene mei-P26 is referred to in FlyBase by the symbol Dmel\mei-P26 (CG12218, FBgn0026206). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is X:9057300..9065710. It has the cytological map location 8C15. An electronic pipeline based on InterPro domains suggests that it has the molecular function</span>: protein binding; zinc ion binding. There is experimental evidence that it is involved in the biological process</span>: meiosis; germ cell development; gamete generation. 22 alleles are reported. The phenotypes of these alleles are annotated with: ventral nerve cord; egg; ovary; oocyte; embryonic peripheral nervous system; spermatid; testis; egg chamber; nurse cell; spermatozoon. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 1189 amino acids

    Gene Ontology:
    Cellular Component: intracellular [IEA]
    Biological Process: germ cell development [IGI]
    gamete generation [IMP]
    meiosis [IMP]
    Molecular Function: zinc ion binding [IEA]
    protein binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTLEEPVQA ADTVDPCPPG IPNLKTVLSD DASNSSVLED IDVSNTSSSS SSSSSSSSSS  60
   61 GSCSGSGTDT DTGKGSSNVG SLDVTSSSSI GSETSISSTG STAIAGPSTL LDDSNSSGLG 120
  121 LVVDVDSNGS SQELSSHGVT ELDSLEDSCS GLMIKDGDKL CKLCSLRLVM PRILSCLHVF 180
  181 CEDCLQAVVS KDTMSASSPN SCSSSSFDGS EHQNRLSAVF IECPVCKQET PLGPKGIKAL 240
  241 PCDYIVTNIL DLSNLESEHI VCTSCKSKEE AISRCNDCAN FLCNGCDNAH KYMRCFENHH 300
  301 VVRIEDLTKN VHDKLIIHKP VFCPQHVSEN LKYYCFTCQV PTCNDCLLSD HKGSDHHYET 360
  361 ATVAEQAVRA DLEETLSDTL KKADYCNDAG SNLGSALTEL QSQHDTVRQQ IEDAYKCYKR 420
  421 MLESIKDQML NELGRLHSDR ELKIMDLMQS MENTMGKLQH AAQFGQRAVD KANSIEFLLL 480
  481 KPIISAQCLN LMEQTPKCDI NYQLQFDSKP EMFEQFAREM FGKFQTDHID SSPKKLGMTQ 540
  541 QLQQQQQQQQ QLQQQQHQHQ HQVQQQQHHH QQQQQQKQQV QHQQQQQKLQ LQQQQQHQHN 600
  601 SNNLIVGHRG SSSVQGRLTS AVFSPISLPS SLQSSFDGDT NSVMSNFSMM DSPPQPSSQQ 660
  661 QLPSAQQQSQ QQQQQQQQQQ AVVLQQVQQQ QKHQQHQVQQ QQQQQVLHQP TSAQSMPQQL 720
  721 GQLVAPQGIV QQAGHVNLNA GPGPNISING LGAGGPPPSF SMLEYNISRL ASLTETMPDT 780
  781 LNDALAVGGG AAGPVPNVVA QVPGGSAVTG AAVVGASHAH QQQSQAVMPA SAVTPTQPIT 840
  841 LADILSGDQR ALNNLQALAK LGLNNNDFCM PPATSPSLQS LNPIVGGVED MGLNNFHAVA 900
  901 APGTTSVVTG RNKATPMQIR CKFGSLGTAK GQFNSPHGFC LGVDEEIIVA DTNNHRIEVF 960
  961 DKMGALKFQF GVAGKEEGQL WYPRKVAVMH NNGKFVVCDR GNERSRMQIF SKCGHFMRKI1020
 1021 AIRYIDIVAG LAVTAKGHIV AVDSVSPTVF VISEEGELVR WFDCSDYMRE PSDIAIRDND1080
 1081 FYVCDFKGHC VAVFQDDGTF LYRIGNEKVT CFPNGIDISN AGDVLIGDSH GNRFHVACYS1140
 1141 REGALQSEFE CPHVKVSRCC GLKITSEGYV VTLAKNNHHV LVLNTLYVH

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..142] MSA 3.087996 View MSA. No confident structure predictions are available.
    2 View Details [143..256] PSI-BLAST 9.0 brca1 RING domain
    3 View Details [257..306] FFAS03 1.16 No description for 2djaA was found.
    4 View Details [307..405] PSI-BLAST 3.69897 No description for 2djaA was found.
    5 View Details [406..584] deduced N/A No confident structure predictions are available.
    6 View Details [585..681] deduced N/A No confident structure predictions are available.
    7 View Details [682..823] deduced N/A No confident structure predictions are available.
    8 View Details [824..1130] PSI-BLAST 11.522879 No description for 2dsoA was found.
    9 View Details [1131..1189] PSI-BLAST 60.0 Brain Tumor NHL domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  1.01071592262962 bayes_pls_golite062009
  • protein binding
    		•  0.90203425705584 bayes_pls_golite062009
  • small conjugating protein ligase activity
    		•  0.4416091696443 bayes_pls_golite062009
  • ubiquitin-protein ligase activity
    		•  0.37374255756548 bayes_pls_golite062009
    3
    Term Confidence Notes
  • binding
    		•  0.708218150245591 bayes_pls_golite062009
  • protein binding
    		•  0.541106389480954 bayes_pls_golite062009
    4
    Term Confidence Notes
  • binding
    		•  0.761251456948551 bayes_pls_golite062009
  • protein binding
    		•  0.625049611190327 bayes_pls_golite062009
    5 No functions predicted.
    6 No functions predicted.
    7 No functions predicted.
    8
    Term Confidence Notes
  • binding
    		•  0.72313618624382 bayes_pls_golite062009
  • protein binding
    		•  0.102154670407903 bayes_pls_golite062009
    9 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle