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Protein Overview: FBpp0305496, fend-PB

General Information:
Name(s) found: FBpp0305496 [FlyBase]
fend-PB / FBpp0071284 [FlyBase]
Description(s) found:
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  • gi|22831981|gb|AAF46447.2| ld14 [Drosophila melanogaster] [NCBI NR]
  • gi|18858949|ref|NP_572528.1| ld14 [Drosophila melanogaster] [NCBI NR]
  • gi|18150102|dbj|BAB83666.1| transmembrane protein FEND [Drosophila melanogaster] [NCBI NR]
  • gi|157816748|gb|ABV82367.1| LD05628p [Drosophila melanogaster] [NCBI NR]
  • gi|12003244|gb|AAG43498.1|AF209858_1 LD14 [Drosophila melanogaster] [NCBI NR]
  • Transmembrane protein fend OS=Drosophila melanogaster GN=fend PE=2 SV=1 [Swiss-Prot]
  • type=protein; loc=X:complement(9019277..9019687,9020093..9020335,9021099..9021146,9027973..9028236); ID=FBpp0305496; name=fend-PC; parent=FBgn0030090,FBtr0333304; dbxref=REFSEQ:NP_001259372,GB_protein:AGB95215,FlyBase:FBpp0305496,FlyBase_Annotation_IDs:CG12664-PC; MD5=daf146c5fc7d47d2467d92b4e403bbb4; length=321; release=r5.56; species=Dmel; [FlyBase]
  • The gene forked end is referred to in FlyBase by the symbol Dmel\fend (CG12664, FBgn0030090). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is X:9019165..9029051. It has the cytological map location 8C11-8C13. Its molecular function is unknown. There is experimental evidence that it is involved in the biological process</span>: motor axon guidance. 14 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
  • >CG12664-PB translation from_gene[CG12664 ld14 FBgn0030090] seq_release:3 mol_weight=34626 cds_boundaries:(X:8,864,231..8,873,187[-]) aa_length:321 transcript_info:[CG12664-RB seq_release:3] gene_info:[gene symbol:ld14 FBgn0030090 gene_boundaries:(X:8, [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q9GNL3) LD14 (Transmembrane protein FEND precursor) (CG12664 protein) [DrosMelano7227.FASTAC.txt]
  • CG12664-PB [Drosophila melanogaster]gi|18150102|dbj|BAB83666.1| transmembrane protein FEND [Drosophila melanogaster]gi|18858949|ref|NP_572528.1| CG12664-PB [Drosophila melanogaster]gi|12003244|gb|AAG43498.1| LD14 [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=X:complement(9019277..9019687,9020093..9020335,9021099..9021146,9027973..9028236); ID=FBpp0071284; name=fend-PB; parent=FBgn0030090,FBtr0071349; dbxref=FlyBase:FBpp0071284,FlyBase_Annotation_IDs:CG12664-PB,GB_protein:AAF46447.2,REFSEQ:NP [fly-100309-contam.fasta]
  • CG12664-PB [Drosophila melanogaster] [nr-271106-contam.fasta]
  • transmembrane protein FEND [Drosophila melanogaster] [nr-271106-contam.fasta]
  • ld14 CG12664-PB [Drosophila melanogaster] [nr-271106-contam.fasta]
  • LD14 [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=X:complement(9019277..9019687,9020093..9020335,9021099..9021146,9027973..9028236); ID=FBpp0071284; name=fend-PB; parent=FBgn0030090,FBtr0071349; dbxref=FlyBase:FBpp0071284,FlyBase_Annotation_IDs:CG12664-PB,GB_protein:AAF46447.2,REFSEQ:NP_572528,GB_protein:AAF46447; MD5=daf146c5fc7d47d2467d92b4e403bbb4; length=321; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=X:complement(9019277..9019687,9020093..9020335,9021099..9021146,9027973..9028236); ID=FBpp0071284; name=fend-PB; parent=FBgn0030090,FBtr0071349; dbxref=FlyBase:FBpp0071284,FlyBase_Annotation_IDs:CG12664-PB,GB_protein:AAF46447.2,REFSEQ:NP_572528,GB_protein:AAF46447; MD5=daf146c5fc7d47d2467d92b4e403bbb4; length=321; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • Forked end OS=Drosophila melanogaster GN=fend PE=2 SV=1 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=X:complement(9019277..9019687,9020093..9020335,9021099..9021146,9027973..9028236); ID=FBpp0071284; name=fend-PB; parent=FBgn0030090,FBtr0071349; dbxref=FlyBase:FBpp0071284,FlyBase_Annotation_IDs:CG12664-PB,GB_protein:AAF46447.2,REFSEQ:NP_572528,GB_protein:AAF46447,FlyMine:FBpp0071284,modMine:FBpp0071284; MD5=daf146c5fc7d47d2467d92b4e403bbb4; length=321; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=X:complement(9019277..9019687,9020093..9020335,9021099..9021146,9027973..9028236); ID=FBpp0305496; name=fend-PC; parent=FBgn0030090,FBtr0333304; dbxref=FlyBase:FBpp0305496,FlyBase_Annotation_IDs:CG12664-PC; MD5=daf146c5fc7d47d2467d92b4e403bbb4; length=321; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=X:complement(join(9133940..9134203,9127066..9127113,9126060..9126302,9125244..9125654)); ID=FBpp0071284; name=fend-PB; parent=FBgn0030090,FBtr0071349; dbxref=FlyBase:FBpp0071284,FlyBase_Annotation_IDs:CG12664-PB,GB_protein:AAF46447.2,REFSEQ:NP_572528,GB_protein:AAF46447,FlyMine:FBpp0071284,modMine:FBpp0071284; MD5=daf146c5fc7d47d2467d92b4e403bbb4; length=321; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=X:complement(join(9133940..9134203,9127066..9127113,9126060..9126302,9125244..9125654)); ID=FBpp0305496; name=fend-PC; parent=FBgn0030090,FBtr0333304; dbxref=REFSEQ:NP_001259372,GB_protein:AGB95215,FlyBase:FBpp0305496,FlyBase_Annotation_IDs:CG12664-PC; MD5=daf146c5fc7d47d2467d92b4e403bbb4; length=321; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=X:complement(join(9133940..9134203,9127066..9127113,9126060..9126302,9125244..9125654)); ID=FBpp0071284; name=fend-PB; parent=FBgn0030090,FBtr0071349; dbxref=FlyBase:FBpp0071284,FlyBase_Annotation_IDs:CG12664-PB,GB_protein:AAF46447.2,REFSEQ:NP_572528,GB_protein:AAF46447,FlyMine:FBpp0071284,modMine:FBpp0071284; MD5=daf146c5fc7d47d2467d92b4e403bbb4; length=321; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • type=protein; loc=X:complement(join(9133940..9134203,9127066..9127113,9126060..9126302,9125244..9125654)); ID=FBpp0305496; name=fend-PC; parent=FBgn0030090,FBtr0333304; dbxref=REFSEQ:NP_001259372,GB_protein:AGB95215,FlyBase:FBpp0305496,FlyBase_Annotation_IDs:CG12664-PC; MD5=daf146c5fc7d47d2467d92b4e403bbb4; length=321; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • Isoform of Q9GNL3, Forked end, isoform C OS=Drosophila melanogaster GN=fend PE=1 SV=1 [DROME.fasta.20160308]
  • FBpp0071284 type=protein; loc=X:complement(join(9133940..9134203,9127066..9127113,9126060..9126302,9125244..9125654)); ID=FBpp0071284; name=fend-PB; parent=FBgn0030090,FBtr0071349; dbxref=FlyBase:FBpp0071284,FlyBase_Annotation_IDs:CG12664-PB,GB_protein:AAF46447.2,REFSEQ:NP_572528,GB_protein:AAF46447,FlyMine:FBpp0071284,modMine:FBpp0071284; MD5=daf146c5fc7d47d2467d92b4e403bbb4; length=321; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • FBpp0305496 type=protein; loc=X:complement(join(9133940..9134203,9127066..9127113,9126060..9126302,9125244..9125654)); ID=FBpp0305496; name=fend-PC; parent=FBgn0030090,FBtr0333304; dbxref=REFSEQ:NP_001259372,GB_protein:AGB95215,FlyBase:FBpp0305496,FlyBase_Annotation_IDs:CG12664-PC; MD5=daf146c5fc7d47d2467d92b4e403bbb4; length=321; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=X:complement(join(9133940..9134203,9127066..9127113,9126060..9126302,9125244..9125654)); ID=FBpp0071284; name=fend-PB; parent=FBgn0030090,FBtr0071349; dbxref=FlyBase:FBpp0071284,FlyBase_Annotation_IDs:CG12664-PB,GB_protein:AAF46447.2,REFSEQ:NP_572528,GB_protein:AAF46447,UniProt/Swiss-Prot:Q9GNL3,FlyMine:FBpp0071284,modMine:FBpp0071284; MD5=daf146c5fc7d47d2467d92b4e403bbb4; length=321; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
  • type=protein; loc=X:complement(join(9133940..9134203,9127066..9127113,9126060..9126302,9125244..9125654)); ID=FBpp0305496; name=fend-PC; parent=FBgn0030090,FBtr0333304; dbxref=REFSEQ:NP_001259372,GB_protein:AGB95215,FlyBase:FBpp0305496,FlyBase_Annotation_IDs:CG12664-PC,UniProt/Swiss-Prot:Q9GNL3; MD5=daf146c5fc7d47d2467d92b4e403bbb4; length=321; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 321 amino acids

    Gene Ontology:
    Cellular Component: plasma membrane [NAS]
    Biological Process: motor axon guidance [IMP]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFHSLVLMAC ALAALSVAQG AGSARSKSLP LSLSLSVSVS SSLASASSPG AAADPTAAFT  60
   61 VTATAPTPAS APFAGKQLNR CRQSCYQQLS KDWHYCKDSV DCTNCCQKLV APFELRILKA 120
  121 QRQESLVLTD IGWDEMIANA SRQCLITWEV SGGGLIGNLL TDTARAELSL WPDTVYNIQV 180
  181 KCKHKLTGLM RRSIKLNVDT SQLVGTTTTT TTSKSSIQRQ HLEQPVDHTD ALEHSQHIRI 240
  241 PRPTDRVYII SALPTPSELG GVVYPAFGAL AFFLALLVMF LFLRPQRKRF PLDADSADTA 300
  301 TLIGRSSSSS RNSMDASTLH V

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..123] deduced N/A No confident structure predictions are available.
    2 View Details [124..321] MSA 1.005969 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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