YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: FBpp0305496, fend-PB
Organism: Drosophila melanogaster
Length: 321 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0305496, fend-PB.

Description E-value Query
Range
Subject
Range
gi|125981851, gi... - gi|54643241|gb|EAL31985.1| GA11746-PA [Drosophila pseudoobscura], gi|125981851|ref|XP_001354929.1| G...
313.0 [0..120] [321..137]

Back

Predicted Domain #1
Region A:
Residues: [1-123]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFHSLVLMAC ALAALSVAQG AGSARSKSLP LSLSLSVSVS SSLASASSPG AAADPTAAFT  60
   61 VTATAPTPAS APFAGKQLNR CRQSCYQQLS KDWHYCKDSV DCTNCCQKLV APFELRILKA 120
  121 QRQ

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [124-321]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ESLVLTDIGW DEMIANASRQ CLITWEVSGG GLIGNLLTDT ARAELSLWPD TVYNIQVKCK  60
   61 HKLTGLMRRS IKLNVDTSQL VGTTTTTTTS KSSIQRQHLE QPVDHTDALE HSQHIRIPRP 120
  121 TDRVYIISAL PTPSELGGVV YPAFGALAFF LALLVMFLFL RPQRKRFPLD ADSADTATLI 180
  181 GRSSSSSRNS MDASTLHV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle