YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: FBpp0305496, fend-PB
Organism: Drosophila melanogaster
Length: 321 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0305496, fend-PB.

Description E-value Query
Range
Subject
Range
gi|125981851, gi... - gi|54643241|gb|EAL31985.1| GA11746-PA [Drosophila pseudoobscura], gi|125981851|ref|XP_001354929.1| G...
313.0 [0..120] [321..137]

Back

Predicted Domain #1
Region A:
Residues: [1-123]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFHSLVLMAC ALAALSVAQG AGSARSKSLP LSLSLSVSVS SSLASASSPG AAADPTAAFT  60
   61 VTATAPTPAS APFAGKQLNR CRQSCYQQLS KDWHYCKDSV DCTNCCQKLV APFELRILKA 120
  121 QRQ

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [124-321]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ESLVLTDIGW DEMIANASRQ CLITWEVSGG GLIGNLLTDT ARAELSLWPD TVYNIQVKCK  60
   61 HKLTGLMRRS IKLNVDTSQL VGTTTTTTTS KSSIQRQHLE QPVDHTDALE HSQHIRIPRP 120
  121 TDRVYIISAL PTPSELGGVV YPAFGALAFF LALLVMFLFL RPQRKRFPLD ADSADTATLI 180
  181 GRSSSSSRNS MDASTLHV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle