YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: CG12065-PB, CG12...

General Information:
Name(s) found: CG12065-PB / FBpp0071161 [FlyBase]
CG12065-PA / FBpp0071160 [FlyBase]
Description(s) found:
SHOW ONLY BEST
  • gi|7290954|gb|AAF46394.1| CG12065, isoform A [Drosophila melanogaster] [NCBI NR]
  • gi|24640633|ref|NP_727278.1| CG12065, isoform B [Drosophila melanogaster] [NCBI NR]
  • gi|24640631|ref|NP_572493.1| CG12065, isoform A [Drosophila melanogaster] [NCBI NR]
  • gi|22831960|gb|AAN09237.1| CG12065, isoform B [Drosophila melanogaster] [NCBI NR]
  • This gene is referred to in FlyBase by the symbol Dmel\CG12065 (CG12065, FBgn0030052). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is X:8468337..8482561. It has the cytological map location 7F5-7F7. An electronic pipeline based on InterPro domains suggests that it has the molecular function</span>: catalytic activity. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process</span>: nucleoside metabolic process. 5 alleles are reported. No phenotypic data is available. It has 6 annotated transcripts and 6 annotated polypeptides. [FlyBase]
  • >CG12065-PA translation from_gene[CG12065 CG12065 FBgn0030052] seq_release:3 mol_weight=76661 cds_boundaries:(X:8,322,613..8,327,110[+]) aa_length:687 transcript_info:[CG12065-RA seq_release:3] gene_info:[gene symbol:CG12065 FBgn0030052 gene_boundaries [hmr_yeast5_DM3-1_pombe.fasta]
  • >CG12065-PB translation from_gene[CG12065 CG12065 FBgn0030052] seq_release:3 mol_weight=76661 cds_boundaries:(X:8,322,613..8,327,110[+]) aa_length:687 transcript_info:[CG12065-RB seq_release:3] gene_info:[gene symbol:CG12065 FBgn0030052 gene_boundaries [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q9W3D6) CG12065 protein [DrosMelano7227.FASTAC.txt]
  • (AE003444) CG12065 gene product [Drosophila melanogaster] [yeastflysequest.fasta]
  • CG12065-PB, isoform B [Drosophila melanogaster]gi|7290954|gb|AAF46394.1| CG12065-PA, isoform A [Drosophila melanogaster]gi|24640633|ref|NP_727278.1| CG12065-PB [Drosophila melanogaster]gi|24640631|ref|NP_572493.1| CG12065-PA [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=X:join(8477700..8478288,8478489..8478608,8478876..8478956,8479843..8479951,8480019..8480278,8480585..8480641,8481291..8481558,8481621..8482200); ID=FBpp0071160; name=CG12065-PA; parent=FBgn0030052,FBtr0071214; dbxref=FlyBase:FBpp0071160, [fly-100309-contam.fasta]
  • type=protein; loc=X:join(8477700..8478288,8478489..8478608,8478876..8478956,8479843..8479951,8480019..8480278,8480585..8480641,8481291..8481558,8481621..8482200); ID=FBpp0071161; name=CG12065-PB; parent=FBgn0030052,FBtr0071215; dbxref=FlyBase:FBpp0071161, [fly-100309-contam.fasta]
  • CG12065-PB, isoform B [Drosophila melanogaster] [nr-271106-contam.fasta]
  • CG12065-PA, isoform A [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=X:join(8477700..8478288,8478489..8478608,8478876..8478956,8479843..8479951,8480019..8480278,8480585..8480641,8481291..8481558,8481621..8482200); ID=FBpp0071160; name=CG12065-PA; parent=FBgn0030052,FBtr0071214; dbxref=FlyBase:FBpp0071160,FlyBase_Annotation_IDs:CG12065-PA,GB_protein:AAF46394.1,REFSEQ:NP_572493,GB_protein:AAF46394; MD5=ba6865966f52c8840a58752d8637511b; length=687; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=X:join(8477700..8478288,8478489..8478608,8478876..8478956,8479843..8479951,8480019..8480278,8480585..8480641,8481291..8481558,8481621..8482200); ID=FBpp0071161; name=CG12065-PB; parent=FBgn0030052,FBtr0071215; dbxref=FlyBase:FBpp0071161,FlyBase_Annotation_IDs:CG12065-PB,GB_protein:AAN09237.1,REFSEQ:NP_727278,GB_protein:AAN09237; MD5=ba6865966f52c8840a58752d8637511b; length=687; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=X:join(8477700..8478288,8478489..8478608,8478876..8478956,8479843..8479951,8480019..8480278,8480585..8480641,8481291..8481558,8481621..8482200); ID=FBpp0071160; name=CG12065-PA; parent=FBgn0030052,FBtr0071214; dbxref=FlyBase:FBpp0071160,FlyBase_Annotation_IDs:CG12065-PA,GB_protein:AAF46394.1,REFSEQ:NP_572493,GB_protein:AAF46394; MD5=ba6865966f52c8840a58752d8637511b; length=687; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • type=protein; loc=X:join(8477700..8478288,8478489..8478608,8478876..8478956,8479843..8479951,8480019..8480278,8480585..8480641,8481291..8481558,8481621..8482200); ID=FBpp0071161; name=CG12065-PB; parent=FBgn0030052,FBtr0071215; dbxref=FlyBase:FBpp0071161,FlyBase_Annotation_IDs:CG12065-PB,GB_protein:AAN09237.1,REFSEQ:NP_727278,GB_protein:AAN09237; MD5=ba6865966f52c8840a58752d8637511b; length=687; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • CG12065, isoform A OS=Drosophila melanogaster GN=CG12065 PE=1 SV=1 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=X:join(8477700..8478288,8478489..8478608,8478876..8478956,8479843..8479951,8480019..8480278,8480585..8480641,8481291..8481558,8481621..8482200); ID=FBpp0071160; name=CG12065-PA; parent=FBgn0030052,FBtr0071214; dbxref=FlyBase:FBpp0071160,FlyBase_Annotation_IDs:CG12065-PA,GB_protein:AAF46394.1,REFSEQ:NP_572493,GB_protein:AAF46394,FlyMine:FBpp0071160,modMine:FBpp0071160; MD5=ba6865966f52c8840a58752d8637511b; length=687; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=X:join(8477700..8478288,8478489..8478608,8478876..8478956,8479843..8479951,8480019..8480278,8480585..8480641,8481291..8481558,8481621..8482200); ID=FBpp0071161; name=CG12065-PB; parent=FBgn0030052,FBtr0071215; dbxref=FlyBase:FBpp0071161,FlyBase_Annotation_IDs:CG12065-PB,GB_protein:AAN09237.1,REFSEQ:NP_727278,GB_protein:AAN09237; MD5=ba6865966f52c8840a58752d8637511b; length=687; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • CG12065, isoform A OS=Drosophila melanogaster GN=CG12065 PE=2 SV=1 [UniProt_D_Melanogaster_07132012_07-13-2012_reversed.fasta]
  • type=protein; loc=X:join(8583667..8584255,8584456..8584575,8584843..8584923,8585810..8585918,8585986..8586245,8586552..8586608,8587258..8587525,8587588..8588167); ID=FBpp0071160; name=CG12065-PA; parent=FBgn0030052,FBtr0071214; dbxref=FlyBase:FBpp0071160,FlyBase_Annotation_IDs:CG12065-PA,GB_protein:AAF46394.1,REFSEQ:NP_572493,GB_protein:AAF46394,FlyMine:FBpp0071160,modMine:FBpp0071160; MD5=ba6865966f52c8840a58752d8637511b; length=687; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=X:join(8583667..8584255,8584456..8584575,8584843..8584923,8585810..8585918,8585986..8586245,8586552..8586608,8587258..8587525,8587588..8588167); ID=FBpp0071161; name=CG12065-PB; parent=FBgn0030052,FBtr0071215; dbxref=FlyBase:FBpp0071161,FlyBase_Annotation_IDs:CG12065-PB,GB_protein:AAN09237.1,REFSEQ:NP_727278,GB_protein:AAN09237; MD5=ba6865966f52c8840a58752d8637511b; length=687; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=X:join(8583667..8584255,8584456..8584575,8584843..8584923,8585810..8585918,8585986..8586245,8586552..8586608,8587258..8587525,8587588..8588167); ID=FBpp0071160; name=CG12065-PA; parent=FBgn0030052,FBtr0071214; dbxref=FlyBase:FBpp0071160,FlyBase_Annotation_IDs:CG12065-PA,GB_protein:AAF46394.1,REFSEQ:NP_572493,GB_protein:AAF46394,FlyMine:FBpp0071160,modMine:FBpp0071160; MD5=ba6865966f52c8840a58752d8637511b; length=687; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • type=protein; loc=X:join(8583667..8584255,8584456..8584575,8584843..8584923,8585810..8585918,8585986..8586245,8586552..8586608,8587258..8587525,8587588..8588167); ID=FBpp0071161; name=CG12065-PB; parent=FBgn0030052,FBtr0071215; dbxref=FlyBase:FBpp0071161,FlyBase_Annotation_IDs:CG12065-PB,GB_protein:AAN09237.1,REFSEQ:NP_727278,GB_protein:AAN09237; MD5=ba6865966f52c8840a58752d8637511b; length=687; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • Uncharacterized protein, isoform A OS=Drosophila melanogaster GN=CG12065 PE=1 SV=1 [DROME.fasta.20160308]
  • FBpp0071160 type=protein; loc=X:join(8583667..8584255,8584456..8584575,8584843..8584923,8585810..8585918,8585986..8586245,8586552..8586608,8587258..8587525,8587588..8588167); ID=FBpp0071160; name=CG12065-PA; parent=FBgn0030052,FBtr0071214; dbxref=FlyBase:FBpp0071160,FlyBase_Annotation_IDs:CG12065-PA,GB_protein:AAF46394.1,REFSEQ:NP_572493,GB_protein:AAF46394,FlyMine:FBpp0071160,modMine:FBpp0071160; MD5=ba6865966f52c8840a58752d8637511b; length=687; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • FBpp0071161 type=protein; loc=X:join(8583667..8584255,8584456..8584575,8584843..8584923,8585810..8585918,8585986..8586245,8586552..8586608,8587258..8587525,8587588..8588167); ID=FBpp0071161; name=CG12065-PB; parent=FBgn0030052,FBtr0071215; dbxref=FlyBase:FBpp0071161,FlyBase_Annotation_IDs:CG12065-PB,GB_protein:AAN09237.1,REFSEQ:NP_727278,GB_protein:AAN09237; MD5=ba6865966f52c8840a58752d8637511b; length=687; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=X:join(8583667..8584255,8584456..8584575,8584843..8584923,8585810..8585918,8585986..8586245,8586552..8586608,8587258..8587525,8587588..8588167); ID=FBpp0071160; name=CG12065-PA; parent=FBgn0030052,FBtr0071214; dbxref=FlyBase:FBpp0071160,FlyBase_Annotation_IDs:CG12065-PA,GB_protein:AAF46394.1,REFSEQ:NP_572493,GB_protein:AAF46394,UniProt/TrEMBL:Q9W3D6,FlyMine:FBpp0071160,modMine:FBpp0071160; MD5=ba6865966f52c8840a58752d8637511b; length=687; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
  • type=protein; loc=X:join(8583667..8584255,8584456..8584575,8584843..8584923,8585810..8585918,8585986..8586245,8586552..8586608,8587258..8587525,8587588..8588167); ID=FBpp0071161; name=CG12065-PB; parent=FBgn0030052,FBtr0071215; dbxref=FlyBase:FBpp0071161,FlyBase_Annotation_IDs:CG12065-PB,GB_protein:AAN09237.1,REFSEQ:NP_727278,GB_protein:AAN09237,UniProt/TrEMBL:Q9W3D6; MD5=ba6865966f52c8840a58752d8637511b; length=687; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 687 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: nucleoside metabolic process [IEA]
    Molecular Function: catalytic activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSERRSHIQM APPPPPPKPN KSQTANGNGI GNGTGIGTGT GNGTLPNGNK NYNKIVAVQD  60
   61 QEPLAQNSSG VQRSQSPPRT EQVVMTPRGK TANSTVILIE RKLVDEINDR VHVAGGDHTG 120
  121 IIINKDTVAG QKSASKAAAL SLEFRVFLVS ANTGKHSQES RTLRFWFRDW LTNEEKQAHI 180
  181 AQDFFKELVS PQDFPRDYVG FIKKIMKLLQ HGYSEIQSIE IELRILEETS APPSRPPRDG 240
  241 YIIYCYGDCN RKFEEALMAQ RKTVSLEESQ FESPPLTQEK VLELIEQAYP NPVSPEDLAK 300
  301 DYGWSEQDVL LVIKSLQERG LIKSMEYNAY TRIHHEDKEI KVVKQMPTIA SNKQPTIAII 360
  361 TAQYCEKLAV DAMLENKETF VRYTTVDSDP NLTNSLRKSK KKRRFGESNV YTLGNIGAHR 420
  421 IVSTKLPSVG SNREAMTATG NTTTRLLGTF QKVDYVFIVG VAGGVPHYTD YKKHVRLGDV 480
  481 VISYVDKQRA LISNSKEKPY VYLYKSGEDV KTYFPVNDSL QQIAESLQAN MQVKRPWEDY 540
  541 LNQAQQALAQ KTDADFNRPD ARTDKLFMNI GNNEVIEVAH PIAADEVDGV NRLRLHLGPI 600
  601 GSGRDLVRSD ELRTQFARKY GLLATDVEMS SVLDSIIGNC RESFILVKGI ADYKDGTSTR 660
  661 KWQNFAAISA ASVVKSVICG MDAPTNV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..92] deduced N/A No confident structure predictions are available.
    2 View Details [93..355] MSA 3.014969 View MSA. No confident structure predictions are available.
    3 View Details [356..687] PSI-BLAST 36.69897 No description for 1zosA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle