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Protein Overview: FBpp0303850, CG1...

General Information:
Name(s) found: FBpp0303850 [FlyBase]
CG10778-PA / FBpp0071083 [FlyBase]
Description(s) found:
Found 26 descriptions.
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  • type=protein; loc=X:complement(7826082..7826327,7826570..7827226); ID=FBpp0303850; name=CG10778-PB; parent=FBgn0029980,FBtr0331433; dbxref=REFSEQ:NP_001259316,GB_protein:AGB95161,FlyBase:FBpp0303850,FlyBase_Annotation_IDs:CG10778-PB; MD5=bf3a49064b7aa4fd2c3e9687e491808a; length=300; release=r5.56; species=Dmel; [FlyBase]
  • This gene is referred to in FlyBase by the symbol Dmel\CG10778 (CG10778, FBgn0029980). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is X:7825762..7827313. It has the cytological map location 7C4. An electronic pipeline based on InterPro domains suggests that it has the molecular function</span>: transferase activity, transferring alkyl or aryl (other than methyl) groups. There is experimental evidence that it is involved in the biological process</span>: phagocytosis, engulfment. 2 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 300 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: phagocytosis, engulfment [IMP]
    Molecular Function: transferase activity, transferring alkyl or aryl (other than methyl) groups [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSWVSDYKYT WTERIAMRTL RACGYIPHHV AFVMDGNRRF ARSQQIDKIE GHSRGFEKLA  60
   61 DCLRWCLDVG VREVTTFAFS IENFKRSNEE VEGLFNLARE KFARLLEETA RLDEHGIRIR 120
  121 VIGNIELLPH DLQKLVASAM LSTERNDKLF LNVAFAYTSR DEITQAVETI LRHGSQDLAG 180
  181 EDISERLLEE CLYTRHSPPP DLVFRTSGET RLSDFMMWQL STSVLYFSNV LWPQITFWHF 240
  241 LASILAYQRD RWQLDDFRRA ERMQSCQLAK ATDFYSERVQ NFLTTIDEDR RKLLVRLAAN 300
  301

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..300] PSI-BLAST 87.39794 Undecaprenyl diphosphate synthase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • prenyltransferase activity
    		•  4.40397054534951 bayes_pls_golite062009
  • di-trans,poly-cis-decaprenylcistransferase activity
    		•  3.07573514495519 bayes_pls_golite062009
  • transferase activity
    		•  1.42376896518855 bayes_pls_golite062009
  • binding
    		•  1.19249144486008 bayes_pls_golite062009
  • catalytic activity
    		•  0.878978773660153 bayes_pls_golite062009
  • dehydrodolichyl diphosphate synthase activity
    		•  0.761527128946352 bayes_pls_golite062009
  • protein binding
    		•  0.555364167462951 bayes_pls_golite062009
  • transferase activity, transferring alkyl or aryl (other than methyl) groups
    		•  0.256467886977999 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.52

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle