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View Structure Prediction Details

Protein: FBpp0303850, CG1...
Organism: Drosophila melanogaster
Length: 300 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0303850, CG1....

Description E-value Query
Range
Subject
Range
DHDDS - dehydrodolichyl diphosphate synthase
357.0 [0..1] [300..1]

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Predicted Domain #1
Region A:
Residues: [1-300]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSWVSDYKYT WTERIAMRTL RACGYIPHHV AFVMDGNRRF ARSQQIDKIE GHSRGFEKLA  60
   61 DCLRWCLDVG VREVTTFAFS IENFKRSNEE VEGLFNLARE KFARLLEETA RLDEHGIRIR 120
  121 VIGNIELLPH DLQKLVASAM LSTERNDKLF LNVAFAYTSR DEITQAVETI LRHGSQDLAG 180
  181 EDISERLLEE CLYTRHSPPP DLVFRTSGET RLSDFMMWQL STSVLYFSNV LWPQITFWHF 240
  241 LASILAYQRD RWQLDDFRRA ERMQSCQLAK ATDFYSERVQ NFLTTIDEDR RKLLVRLAAN 300
  301 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 87.39794
Match: 1jp3A
Description: Undecaprenyl diphosphate synthase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
prenyltransferase activity 4.40397054534951 bayes_pls_golite062009
di-trans,poly-cis-decaprenylcistransferase activity 3.07573514495519 bayes_pls_golite062009
transferase activity 1.42376896518855 bayes_pls_golite062009
binding 1.19249144486008 bayes_pls_golite062009
catalytic activity 0.878978773660153 bayes_pls_golite062009
dehydrodolichyl diphosphate synthase activity 0.761527128946352 bayes_pls_golite062009
protein binding 0.555364167462951 bayes_pls_golite062009
transferase activity, transferring alkyl or aryl (other than methyl) groups 0.256467886977999 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle