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Protein Overview: hdm-PA

General Information:
Name(s) found: hdm-PA / FBpp0071085 [FlyBase]
Description(s) found:
Found 20 descriptions.
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  • The gene hold'em is referred to in FlyBase by the symbol Dmel\hdm (CG15329, FBgn0029977). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is X:7812550..7814164. It has the cytological map location 7C3. Its molecular function is unknown. There is experimental evidence that it is involved in the biological process</span>: reciprocal meiotic recombination. 5 alleles are reported. The phenotype of these alleles is annotated with: presumptive oocyte. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 486 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: reciprocal meiotic recombination [IMP]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARRIKFQRL AEMRPTMTRF STVALIVSKS SPNIFYDKMS GTERGVLSLT IRDSPNHLTN  60
   61 CKCWGQRDCV DEYAAMLQIG HVVDIVGAKV MSIPFAAPGE QRYQPQATVS CALVVNEGSG 120
  121 YVVRHDNDDF GQITILQQLL HQPIRPLGAV LKLADVRSGL GFPDKIITTN VNLLVVVAAV 180
  181 RPVRQIKRKL QGPLSEVQEL LQCLEVIVID ASYPEGMLLS VWQPDWIQRA QQWQPRRTVL 240
  241 HLIDVRVSYS NFHRSLVLSH SNCTLICENP QAAGDDCRLL LAFAATVPLT TFSGCDQAEL 300
  301 DNMPAVASIQ AQMTVRQIYS RAEGELQDPS IHQFTAVLYG MVTKFDLDGL TSHVNRKCIA 360
  361 CQQHIPRNLQ DCASDACQQY FSLDNDEPRS ISYFNINIHL SDQTGTLVEA RLAGHPAERI 420
  421 LGLRAEDFER LAEREKSELK WRFLLKYFEV RLMIKKPVGV RNHLVIVVVD MQAIPLEKLV 480
  481 ANMVVF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..290] PSI-BLAST 50.09691 Replication protein A 70 KDa subunit (RPA70)
    2 View Details [291..486] PSI-BLAST 38.221849 Replication protein A 70 KDa subunit (RPA70)


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.55

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle