| Protein: | hdm-PA |
| Organism: | Drosophila melanogaster |
| Length: | 486 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for hdm-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
372.0 | [0..4] | [482..235] |
|
Region A: Residues: [1-290] |
1 11 21 31 41 51
| | | | | |
1 MARRIKFQRL AEMRPTMTRF STVALIVSKS SPNIFYDKMS GTERGVLSLT IRDSPNHLTN 60
61 CKCWGQRDCV DEYAAMLQIG HVVDIVGAKV MSIPFAAPGE QRYQPQATVS CALVVNEGSG 120
121 YVVRHDNDDF GQITILQQLL HQPIRPLGAV LKLADVRSGL GFPDKIITTN VNLLVVVAAV 180
181 RPVRQIKRKL QGPLSEVQEL LQCLEVIVID ASYPEGMLLS VWQPDWIQRA QQWQPRRTVL 240
241 HLIDVRVSYS NFHRSLVLSH SNCTLICENP QAAGDDCRLL LAFAATVPLT
|
| Detection Method: |  |
| Confidence: | 50.09691 |
| Match: | 1jmcA |
| Description: | Replication protein A 70 KDa subunit (RPA70) |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [291-486] |
1 11 21 31 41 51
| | | | | |
1 TFSGCDQAEL DNMPAVASIQ AQMTVRQIYS RAEGELQDPS IHQFTAVLYG MVTKFDLDGL 60
61 TSHVNRKCIA CQQHIPRNLQ DCASDACQQY FSLDNDEPRS ISYFNINIHL SDQTGTLVEA 120
121 RLAGHPAERI LGLRAEDFER LAEREKSELK WRFLLKYFEV RLMIKKPVGV RNHLVIVVVD 180
181 MQAIPLEKLV ANMVVF
|
| Detection Method: | |
| Confidence: | 38.221849 |
| Match: | 1l1oC |
| Description: | Replication protein A 70 KDa subunit (RPA70) |
Matching Structure (courtesy of the PDB): |
|
