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Protein Overview: RpS6-PB

General Information:
Name(s) found: RpS6-PB / FBpp0071087 [FlyBase]
Description(s) found:
Found 27 descriptions.
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  • The gene Ribosomal protein S6 is referred to in FlyBase by the symbol Dmel\RpS6 (CG10944, FBgn0004922). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is X:7793653..7795362. It has the cytological map location 7C2. Based on sequence similarity, it is predicted to have molecular function</span>: structural constituent of ribosome. There is experimental evidence that it is involved in the biological process</span>: mitotic spindle elongation; mitotic spindle organization. 7 alleles are reported. The phenotype of these alleles is annotated with: lymph gland. It has 2 annotated transcripts and 2 annotated polypeptides. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 248 amino acids

    Gene Ontology:
    Cellular Component: lipid particle [IDA]
    cytosolic small ribosomal subunit [ISS][NAS]
    ribosome [NAS]
    Biological Process: mitotic spindle elongation [IMP]
    immune response [TAS]
    mitotic spindle organization [IMP]
    translation [ISS][NAS]
    Molecular Function: structural constituent of ribosome [ISS][NAS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLNVSYPAT GCQKLFEVVD EHKLRVFYEK RMGQVVEADI LGDEWKGYQL RIAGGNDKQG  60
   61 FPMKQGVLTH GRVRLLLKKG HSCYRPRRTG ERKRKSVRGC IVDANMSVLA LVVLKKGEKD 120
  121 IPGLTDTTIP RRLGPKRASK IRKLYNLSKE DDVRRFVVRR PLPAKDNKKA TSKAPKIQRL 180
  181 ITPVVLQRKH RRIALKKKRQ IASKEASADY AKLLVQRKKE SKAKREEAKR RRSASIRESK 240
  241 SSVSSDKK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..128] Pfam 94.508638 No description for PF01092.10 was found. No confident structure predictions are available.
    2 View Details [129..248] MSA 4.041986 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle