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Protein Overview: CBP-PA

General Information:
Name(s) found: CBP-PA / FBpp0071011 [FlyBase]
Description(s) found:
Found 25 descriptions.
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  • The gene sarcoplasmic calcium-binding protein is referred to in FlyBase by the symbol Dmel\CBP (CG1435, FBgn0026144). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is X:7231403..7236768. It has the cytological map location 7B2. Based on sequence similarity, it is predicted to have molecular function</span>: calcium ion binding. The biological processes in which it is involved are not known. 15 alleles are reported. The phenotype of these alleles is annotated with: intersegmental nerve. It has 2 annotated transcripts and 2 annotated polypeptides. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 298 amino acids

    Gene Ontology:
    Cellular Component: sarcoplasmic reticulum [ISS]
    Biological Process: NONE FOUND
    Molecular Function: calcium ion binding [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAFSIVSRGI LRTSREILER NMAATVGVLQ QNASPPPNTP ISHSDCHRLA SGGIICGHGA  60
   61 HSLLWHQMPT AVVQAVRQYS KKAGAAKLRR EVESDSDSDS DDEFERRRQK MDSKRSERGD 120
  121 SAFWRRKMRT LHRILDVNHD GVVSFDDFSL LAKRFSDLGH LTPEVAAEFN DVIKHTWEEQ 180
  181 FGEITPYNLV TAEQFLTDLH HRLNDKKMAK RIGRFLPYLF KAVDFDHTGH LDLEQYKLFF 240
  241 RCLGLTEDDA AVSFAVIDKN GDGQLSLKEF VHLGRQFFLT EDDSKISKMF WGPLVADH

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..111] PSI-BLAST 14.39794 Neurocalcin
    2 View Details [112..298] PSI-BLAST 15.522879 Solution structure and dynamics of Nereis sarcoplasmic calcium binding protein

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  1.39263455617025 bayes_pls_golite062009
  • calcium ion binding
    		•  0.326789035157241 bayes_pls_golite062009
  • ion binding
    		•  0.228888934051136 bayes_pls_golite062009
  • cation binding
    		•  0.227323129980928 bayes_pls_golite062009
  • metal ion binding
    		•  0.227323129980928 bayes_pls_golite062009
  • protein binding
    		•  0.0504192768094249 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.95

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle