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View Structure Prediction Details

Protein: CBP-PA
Organism: Drosophila melanogaster
Length: 298 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CBP-PA.

Description E-value Query
Range		 Subject
Range
gi|94411311 - gi|94411311|gb|ABF18599.1| His-6-tagged G-CaMP1.6 [synthetic construct]
 161.0 [0..59] [275..266]
gi|50748592 - gi|50748592|ref|XP_421316.1| PREDICTED: similar to calmodulin 1; Calmodulin 1 (phosphorylase kinase,...
 156.0 [0..117] [275..512]
gi|125545976 - gi|125545976|gb|EAY92115.1| hypothetical protein OsI_13822 [Oryza sativa Indica Group]
gi|115455805, gi... - gi|50355719|gb|AAT75244.1| putative calcium-dependent protein kinase [Oryza sativa (japonica cultiva...
 155.0 [0..39] [287..343]
gi|3320104, gi|1... - pir||T02784 calcium-dependent protein kinase (EC 2.7.1.-) - maize (strain W64A), gi|3320104|emb|CAA...
 151.0 [0..39] [276..363]
gi|28866604 - gi|28866604|emb|CAD70165.1| calcium-dependent protein kinase [Landoltia punctata]
 151.0 [0..32] [276..304]
gi|7434364, gi|1... - pir||T09940 calcium-dependent protein kinase (EC 2.7.1.-) CDPK - pumpkin, gi|1899175|gb|AAB49984.1| ...
 150.0 [0..31] [276..312]

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Predicted Domain #1
Region A:
Residues: [1-111] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAFSIVSRGI LRTSREILER NMAATVGVLQ QNASPPPNTP ISHSDCHRLA SGGIICGHGA  60
   61 HSLLWHQMPT AVVQAVRQYS KKAGAAKLRR EVESDSDSDS DDEFERRRQK M

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 14.39794
Match: 1bjfA
Description: Neurocalcin
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [112-298] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DSKRSERGDS AFWRRKMRTL HRILDVNHDG VVSFDDFSLL AKRFSDLGHL TPEVAAEFND  60
   61 VIKHTWEEQF GEITPYNLVT AEQFLTDLHH RLNDKKMAKR IGRFLPYLFK AVDFDHTGHL 120
  121 DLEQYKLFFR CLGLTEDDAA VSFAVIDKNG DGQLSLKEFV HLGRQFFLTE DDSKISKMFW 180
  181 GPLVADH

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 15.522879
Match: 1q80A
Description: Solution structure and dynamics of Nereis sarcoplasmic calcium binding protein
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 1.39263455617025 bayes_pls_golite062009
calcium ion binding 0.326789035157241 bayes_pls_golite062009
ion binding 0.228888934051136 bayes_pls_golite062009
cation binding 0.227323129980928 bayes_pls_golite062009
metal ion binding 0.227323129980928 bayes_pls_golite062009
protein binding 0.0504192768094249 bayes_pls_golite062009
YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle