YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: Smg1-PA, FBpp0309979

General Information:
Name(s) found: FBpp0309979 [FlyBase]
Smg1-PA / FBpp0070933 [FlyBase]
Description(s) found:
Found 28 descriptions.
SHOW ALL
  • type=protein; loc=X:join(6718671..6719019,6719089..6719452,6719523..6721782,6721851..6725351,6727898..6728217,6728283..6729627,6729678..6730646,6730714..6731062,6731134..6731333); ID=FBpp0309979; name=nonC-PB; parent=FBgn0263968,FBtr0343321; dbxref=FlyBase:FBpp0309979,FlyBase_Annotation_IDs:CG32743-PB; MD5=050bbb5711d7336dd810884e236eca69; length=3218; release=r5.56; species=Dmel; [FlyBase]
  • The gene Smg1 is referred to in FlyBase by the symbol Dmel\Smg1 (CG32743, FBgn0052743). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is X:6718671..6732283. It has the cytological map location 6D3-6D4. It is reported to have molecular function</span>: protein kinase activity. There is experimental evidence that it is involved in the biological process</span>: nuclear-transcribed mRNA catabolic process, nonsense-mediated decay. 7 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 3218 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: nuclear-transcribed mRNA catabolic process, nonsense-mediated decay [IMP][NAS]
    [NOT]gene silencing by miRNA [IMP]
    phosphorylation [NAS]
    [NOT]RNA interference [IMP]
    Molecular Function: protein kinase activity [NAS]
    phosphotransferase activity, alcohol group as acceptor [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKNAIHPENC NGAGTEEEAS SAFHAEIDRV LLNNNGNHGD SSNEGGGGNG SGRGGATGSG  60
   61 NIAGLGGSES MWSPGGGKSH DVAQAFANAL LLRNMNHVVG KGQPVVQNHR KAYQCKGDTI 120
  121 NPMANGEDLR LSKIIRRLIN ENNPTVSLEL CSKLDQAVRT PINMGYMTCS FVWILDNMLT 180
  181 LYKQCPPPVL EECSKTLGLI GFINRKSYPI YEEFIVKNYK SSKRMQKYMI MALRATLSCD 240
  241 TKCELHMYAD KIMLLLKDFL ENAESADIFI VVSNTLVQFA ASYAETFECH FTDVVDIVIG 300
  301 WQLEAGQPTD LKTHCAQVLE QLTPFFSKQI DFSYGLLDQF VEDITTLEEG EPANTAERVG 360
  361 AFVGAFNTLL KCLARMQIFV GMPTCECIVK MAVDHLIKIM PTLHLNTEAL VNINELICIC 420
  421 LLNNFTGLDP ILLEQVLLDQ VKRMISLTEL QRQSVLYLLL CTVRRLRARL TPSLVHFIFQ 480
  481 SNPYMTKVRL RSPGETSYKL LLRTCQETLL IRNVPLLQQA YKYLVDDIDA CLEKLLITAP 540
  541 RSKARKASVL LVFHLSALAA LAKQTSSIIG MYACKPSILE LLLTNCRAHE LKFWSKYPAA 600
  601 QQAIFGLLVV HCQANHNFRT NSSLLRDQEL SAENTSPTAN SFASILRFLD SVLGQAHQLA 660
  661 PQNLRVLLQW IQMLLRECRE KIDLLMEQEN FRGICRNIAA TASKLVPLES AACIQTVLDY 720
  721 GLERLEKYPK LLILYRDTAL QQLQMLSTNY HAPYFQIYAQ LPLHLTLTGG ESSMPGMASR 780
  781 RVSVWQQRIS QYSAVRDNVF RDFFDRVQKP EQDSLIHCLR ELFVRSCQVA PQDERQMNLS 840
  841 QCTKRCQRLA IAWLQFEAAR YCVDQRLRTT VGKPQETFLG FEAIIMRHAR LLSGCAKEIE 900
  901 RSALDDLSLE ELLSMQSNLS LLLGFLDALE KLIYNAAEGS AFALRPPEKQ VAAFFRLNNP 960
  961 TCQSWFNRIR IGVVIIAMHV QQPELVIRYA QQILVNSKTQ DPTYSQAIVY MAWSLVSCQE1020
 1021 ADSLRGLRLW ARGKSCKSYK WLKYAADQAA GKRESALAGY RTILAEKELQ SELEPHTRQF1080
 1081 VVSQMMQCLQ DLGQWSQLVE LKQQQMTRPE DRELNPFLQR SNVEVNALER LLAKSEESCS1140
 1141 SMDALGGVFQ QLSLWPSNWD ESVSSSGLSE RASFSSIHMR QRTEDIVLHK LLEDRCVPDQ1200
 1201 AKNLLDTQWR DSLLNPSFDQ RSCKELTLLR HIVQGVSGGQ ELSLLPVSSG RCQNRSKFIS1260
 1261 SAILMRCLAW TQLLRQHCAP GSWETLCLDA AAAAREEGNL QLAETLLTQF FGQPIGEIAA1320
 1321 LFSLEQGVQT DNPEMLRGYS ELVKCLHLQQ QQSQTHSGDL SSSIDVCAAL CLNIQKSNNQ1380
 1381 PAAGADLLLN LADWIAVRTC NGLTTNQSPV LIQLLDQLPE CPLTCDSSQP LAIPQAERMV1440
 1441 ARLVHSCLQQ RPNYAEALIA YGNWCYRWGK KVADSCCVLT QADATAISQA LDIPQPLESE1500
 1501 KLDELLQALS TEQPPANCVE VCPDAARARD DEAAKNRLRR LTFLADKTPE ALDAILQIWR1560
 1561 RAIANTYDYY KDAARSYFQY LSFKSGSGPE KPEGEGVVSQ RERLHVDDSN LVTTTLRLLR1620
 1621 LIVKHASGLQ EVLEQGLHTT PIAPWKVIIP QLFSRLNHHE PYVRKSVCDL LCRLAKSRPQ1680
 1681 LVIFPAVVGA NREQQDATAP PATARPTTED ACCYGYLLGE LSKQAPEAVQ HVKLMVKELR1740
 1741 RVCLLWDEYW IHSLAHIYNT YVSRVSALAT DFRPDDHEGK NNRFNVWRPQ LLADLEALVA1800
 1801 VTSRPPETTY ERSFRKRFDA PIRLTVDALR HRRYPEAWDK LKQLYHILQS NMIRGSGSTL1860
 1861 KMQSISPVLC GIGRMRISMP GLDAHGPDGD QVYIESVESS VCVLPTKTKP KKVAFYGSNG1920
 1921 QRYTFLFKGM EDLHLDERIM QFLSISNAIM ACRSDAPGNG CYRAHHYSVI PLGPQSGLIS1980
 1981 WVDGVTPVFA LYKKWQQRRS QVAGNAGAGA VANVPRRFTD LFYNKLSPLL AKHNMQVSDP2040
 2041 RRQWPISVLL QVLDELSQET PNDLLARELW CQAGNAAEWR QSVRRFVRCM SVMSMIGYVI2100
 2101 GLGDRHLDNV LINLGSGDIV HIDYNVCFEK GRTLRIPEKV PFRLTQNLVQ AMGITGIEGP2160
 2161 FRLGCEYVLK VMRKERETLL TLLEAFVYDP LVDWTTNDDA QALRRSLNAK LQESADGGGA2220
 2221 GGLGVGDLKY HKKDKNKGKP LDSDVKRQPF LSKLGMLQKY WSTNKTELMP QLEEMEQEVG2280
 2281 NLQAAQAKQV VAEEELVKLN QRSALIAEIK SLGTAIESHS FNTASLRNAV RRGHSEALAL2340
 2341 LSTERLPDFG RVQCILRSYG QCLQLYHLLD LQGQLVKLQM ESNSENAREF SALTEALQLS2400
 2401 GLDSMRSQLN ELLGRMDMVA QKSSKHLQEY AGVMNFYPEQ SHRQNLFVRF HDSFATYIQN2460
 2461 GYTADSTTNT NSPSSSIICK ADVVGVAEAM EYSWERLGCQ LHEASKLYAA NQAQALTLGA2520
 2521 PTTALLSMIV QSGCSQLLLK ASLVRTLDRA GGAFAAYEQV ALASHDDGLL HHQLLFIHLV2580
 2581 RTMLQGVLVM TKEEDQHLAQ LESLLSALSH LKKMFEYDLP ANLYRLLLLQ PNLGKLSALC2640
 2641 HLSASSLAQL FLEATMENGH KPPDQFPVER RFLLTLQPVY DQFLLASTSL DSLVSSMQSM2700
 2701 LEDVHDVQTQ QIMELGLMRS CHTELNDECF FGLVSEALES SRTCDVREMA RPMLGFIHRL2760
 2761 QVEKLAGLLP ILTRNFYTAV GPQCLPTASC GDPAQADHLC ESLFISLQSD GALLQQQAEI2820
 2821 ALLSQQVDLH TLAASAQYWA YSEALGSQLR CGPHIVSRPK LTAAIGECWL ELDQKLTALQ2880
 2881 QLQAGLESQL SQLQTQRSNW NRNHIDNLLR MEQCNKQRTM SHVALLQKMT DGAGAVARLE2940
 2941 QNAIVVGEEG QALVDHLEQW LAAHGQWQAS SSRISAVEQS MVELLDPEGA IDHYWLENVQ3000
 3001 GLLEEQTCKV HREIAAIEGE QQSKHRFICT LLKETLRLLE NMPRFHVQSL CSEAQAQGQG3060
 3061 KMEYANVQLL SDHLREGQGL MQSLYMRLQE LRKDICSDRR VLQPSMLQNW RHQLEMILTL3120
 3121 AKQEVNEFFK GLEDFMQHAG ETDSYEIFTH AKGSGNVHEQ KRNAYGVSVW KKIRMKLEGR3180
 3181 DPDSNQRSTV AEQVDYVIRE ACNPENLAVL YEGWTPWV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data



    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.95

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle