YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: CG3973-PA, FBpp0...

General Information:
Name(s) found: FBpp0310031 [FlyBase]
FBpp0300876 [FlyBase]
CG3973-PA / FBpp0070909 [FlyBase]
Description(s) found:
Found 31 descriptions.
SHOW ALL
  • type=protein; loc=X:join(6524971..6525138,6538595..6538791,6538861..6538979,6539076..6539371,6542050..6542157,6542218..6542414,6542535..6543175,6543239..6544446); ID=FBpp0310031; name=pigs-PC; parent=FBgn0029881,FBtr0343375; dbxref=FlyBase:FBpp0310031,FlyBase_Annotation_IDs:CG3973-PC; MD5=2da1e3bd466510e5d05884937d929377; length=977; release=r5.56; species=Dmel; [FlyBase]
  • type=protein; loc=X:join(6524971..6525138,6538595..6538791,6538861..6538979,6539076..6539371,6542050..6542157,6542218..6542414,6542535..6543175,6543239..6544446); ID=FBpp0300876; name=pigs-PB; parent=FBgn0029881,FBtr0308653; dbxref=FlyBase:FBpp0300876,FlyBase_Annotation_IDs:CG3973-PB,REFSEQ:NP_001245550,GB_protein:AFH07264; MD5=2da1e3bd466510e5d05884937d929377; length=977; release=r5.56; species=Dmel; [FlyBase]
  • This gene is referred to in FlyBase by the symbol Dmel\CG3973 (CG3973, FBgn0029881). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is X:6494098..6546131. It has the cytological map location 6C1-6C3. Its molecular function is unknown. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process</span>: cell cycle arrest. 10 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 977 amino acids

    Gene Ontology:
    Cellular Component: actin cytoskeleton [IDA]
    cytoplasmic microtubule [IDA]
    Biological Process: cell cycle arrest [IEA]
    ovarian follicle cell stalk formation [IMP]
    ovarian follicle cell development [IMP]
    negative regulation of Notch signaling pathway [IMP]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAMLEARPYR PFKSSEEYLE AMREDLAEWL STLYPELSIN ADNFMDRLDT GVALCKHANY  60
   61 VRQAAVDYLA RRQARNKSMT RSMTSGLAGP ILAMGNVHYL PAAKSGTFFA RDNVSNFITW 120
  121 CRKSLKIIEC LLFETDDLIM RKNEKHVILC LLEVARRGAK FGMLAPMLVQ MERQIDREIA 180
  181 ADIKANGAGC SENGTQTDAL ETGNSSAATM TTITTTTVET DLYDDSDDSE TEDDGDQNPV 240
  241 LMYGPQPQII TNDLKSLDEM VRDLVEKCTC PSQFPMVRVS EGKYRIGDTK VLIFVRILRS 300
  301 HVMVRVGGGW DTLSHYLDKH DPCRCRAQHR SSVAARLIPR QSPNHNPSNG IELHKAQVIF 360
  361 ERSPPAARRV FNSPNCNGGP GTGSSCGTGV VGVAVPPTLQ NGHSLSPNSG KYRSRSPTPQ 420
  421 RKFLNQQANG GGIASATGSS QTVTTDTSSG QLLGSPSLAR RSMSPSPRRL IDMRKKQSSL 480
  481 DSYSSGPKSL PGYSCSMEEA NGGSGVGSAA GGVSSGSAGS GVAGEQGGAN KFENISDNGS 540
  541 EISDEGYRSL GVIQSGAQKR ESLHSQASIE DAESNARLDQ TSSDSQISPS DEPAEKATTD 600
  601 ILEEEDLNGQ DREEDQEDYS VCDGPQSLPA ILSGAHKLSD KFEQSGVFIT DDEITVDIAK 660
  661 TEDQSVANTM GNPTPNLSKI PRSPLAQRRR RSIDNSTCGG AGGSLQDLSS RSGLPAPAFS 720
  721 RKQPVYRSVR TRNSTGATTT PVAPPRSRQA TQLPMVRDVT NTWSGRTTGA PKRRPPCTAD 780
  781 TFVAPTNGTG PAGSFERNGK GRSSQILYDS NGRRVRSGAP GCTSSLTTSP VKNHASSPLA 840
  841 QQLLEAASSA KNDAQILEKM KSLLSRYAAG NQTKAGVGAT ATAANKINSN GKKTPVYEDF 900
  901 TTAWVHSNGN LERSESCSPP AKARSKRSSA ASSCESNNSN AGAGSGAAAG SASVVSPRRE 960
  961 RGMSKIPAPV RHHTELY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..187] FFAS03 2.68 Solution structure of the CH domain of human transgelin-2
    2 View Details [188..358] FFAS03 4.13 Solution Structure of the Gas2 Domain of the Growth Arrest Specific 2 Protein
    3 View Details [359..521] MSA 1.168983 View MSA. No confident structure predictions are available.
    4 View Details [522..734] MSA 1.166992 View MSA. No confident structure predictions are available.
    5 View Details [735..833] deduced N/A No confident structure predictions are available.
    6 View Details [834..977] MSA 1.140981 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.52

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle