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Protein Overview: FBpp0303990, Pat1-PA

General Information:
Name(s) found: FBpp0303990 [FlyBase]
Pat1-PA / FBpp0070906 [FlyBase]
Description(s) found:
Found 28 descriptions.
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  • type=protein; loc=X:join(6485617..6485796,6487394..6487980,6488122..6488346,6488417..6488518,6488598..6489274,6489347..6489504,6489569..6489700); ID=FBpp0303990; name=Pat1-PC; parent=FBgn0029878,FBtr0331600; dbxref=REFSEQ:NP_001259286,GB_protein:AGB95131,FlyBase:FBpp0303990,FlyBase_Annotation_IDs:CG10695-PC; MD5=e194a6393f9980dceff3262bdb42b62a; length=686; release=r5.56; species=Dmel; [FlyBase]
  • The gene Protein interacting with APP tail-1 is referred to in FlyBase by the symbol Dmel\Pat1 (CG10695, FBgn0029878). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is X:6484811..6490667. It has the cytological map location 6C1. Based on sequence similarity, it is predicted to have molecular function</span>: microtubule motor activity. There is experimental evidence that it is involved in the biological process</span>: phagocytosis, engulfment. 6 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 686 amino acids

    Gene Ontology:
    Cellular Component: kinesin complex [ISS]
    Biological Process: phagocytosis, engulfment [IMP]
    microtubule-based movement [ISS]
    Molecular Function: microtubule motor activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGQQLVVLI PKINPNSPKT LYDLSLQALI GSMNTKIPAL DRISRLAELP RNLLIDVYEM  60
   61 MSQQESLKDT LLEELAQLEV FARLVRYPFA RSQLLRIMAS LMASQKMLAK RLSENYVSRY 120
  121 EVVAGHEEEE LESSMDTVED RSTEFSSLYT YDSESTNADS ISDFNDEFSA DIGSIVGLPH 180
  181 RRATQEELDA INDSGLEELS AVELQVIDLG LRLGSFLSEA GWMQESITVL ACLNVRLKDL 240
  241 PTHKHWLQFR LDCLQRLLYA ESAHCNFKEA EKTYAELMGL NKWLNKSVPN QLVAITYSQI 300
  301 SAMYFARNEY KNSHLWSGLA MRFLKGYANP RTIIDVLRQA AKACVVKRDF ARANLLICQA 360
  361 VRRAREYFGP THQKYGDALL DYGFFLLNVD SVFQSVNIYK EALAVRRGIF GNMNFHVAIA 420
  421 HEDLSYAYYV HEYSTGDFSC AQDHVDKAVN IMQHLVPSNH LMLASAKRVK ALLLEEIALD 480
  481 KMADGIDEED LLLQSEELHN FALLLSLQVF GEVNVQTAKH YGNLGRLYQT MNRFEEAERM 540
  541 HKKAIKIKSE LLGHFDYEVG LSIGHLASLY NYQMKKYRDA EQLYMRSIDI SLRLFGNSYS 600
  601 GLEYDYLGLC HVYETLHNFE KYLKYAHKLE NWQMLRGQNL TQNKSSYPAI EVDYSIEEVK 660
  661 AKYFSMCASK KSAHPSVHEE DTVNEN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..616] PSI-BLAST 4.221849 Clathrin D6 Coat
    2 View Details [617..686] PSI-BLAST 29.69897 The superhelical TPR domain of O-linked GlcNAc transferase reveals structural similarities to importin alpha.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle