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Protein Overview: CG3556-PA, FBpp0...

General Information:
Name(s) found: FBpp0301042 [FlyBase]
CG3556-PA / FBpp0070642 [FlyBase]
Description(s) found:
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  • gi|74872708|sp|Q9W4K2.1|Y3556_DROME RecName: Full=Uncharacterized protein CG3556; Flags: Precursor [NCBI NR]
  • gi|7290496|gb|AAF45949.1| CG3556 [Drosophila melanogaster] [NCBI NR]
  • gi|24639685|ref|NP_572164.2| CG3556 [Drosophila melanogaster] [NCBI NR]
  • gi|201065997|gb|ACH92408.1| FI07638p [Drosophila melanogaster] [NCBI NR]
  • Uncharacterized protein CG3556 OS=Drosophila melanogaster GN=CG3556 PE=2 SV=1 [Swiss-Prot]
  • type=protein; loc=X:join(4425343..4426711,4426889..4427084,4427153..4427230,4427294..4427376,4427558..4427619); ID=FBpp0301042; name=CG3556-PB; parent=FBgn0029708,FBtr0308916; dbxref=FlyBase:FBpp0301042,FlyBase_Annotation_IDs:CG3556-PB,REFSEQ:NP_001245529,GB_protein:AFH07243; MD5=6cdc0015212cb63b32732b69a43be7c5; length=595; release=r5.56; species=Dmel; [FlyBase]
  • This gene is referred to in FlyBase by the symbol Dmel\CG3556 (CG3556, FBgn0029708). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is X:4424264..4427872. It has the cytological map location 4C7. An electronic pipeline based on InterPro domains suggests that it has the molecular function</span>: cobalamin binding. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process</span>: cobalamin transport. 4 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
  • >CG3556-PA translation from_gene[CG3556 CG3556 FBgn0029708] seq_release:3 mol_weight=65084 cds_boundaries:(X:4,271,926..4,274,199[+]) aa_length:595 transcript_info:[CG3556-RA seq_release:3] gene_info:[gene symbol:CG3556 FBgn0029708 gene_boundaries:(X:4 [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q9W4K2) CG3556 protein [DrosMelano7227.FASTAC.txt]
  • (AE003431) CG3556 gene product [Drosophila melanogaster] [yeastflysequest.fasta]
  • CG3556-PA [Drosophila melanogaster]gi|24639685|ref|NP_572164.2| CG3556-PA [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=X:join(4425343..4426711,4426889..4427084,4427153..4427230,4427294..4427376,4427558..4427619); ID=FBpp0070642; name=CG3556-PA; parent=FBgn0029708,FBtr0070674; dbxref=FlyBase:FBpp0070642,FlyBase_Annotation_IDs:CG3556-PA,GB_protein:AAF45949 [fly-100309-contam.fasta]
  • CG3556-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=X:join(4425343..4426711,4426889..4427084,4427153..4427230,4427294..4427376,4427558..4427619); ID=FBpp0070642; name=CG3556-PA; parent=FBgn0029708,FBtr0070674; dbxref=FlyBase:FBpp0070642,FlyBase_Annotation_IDs:CG3556-PA,GB_protein:AAF45949.1,REFSEQ:NP_572164,GB_protein:AAF45949; MD5=6cdc0015212cb63b32732b69a43be7c5; length=595; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=X:join(4425343..4426711,4426889..4427084,4427153..4427230,4427294..4427376,4427558..4427619); ID=FBpp0070642; name=CG3556-PA; parent=FBgn0029708,FBtr0070674; dbxref=FlyBase:FBpp0070642,FlyBase_Annotation_IDs:CG3556-PA,GB_protein:AAF45949.1,REFSEQ:NP_572164,GB_protein:AAF45949; MD5=6cdc0015212cb63b32732b69a43be7c5; length=595; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • type=protein; loc=X:join(4425343..4426711,4426889..4427084,4427153..4427230,4427294..4427376,4427558..4427619); ID=FBpp0070642; name=CG3556-PA; parent=FBgn0029708,FBtr0070674; dbxref=FlyBase:FBpp0070642,FlyBase_Annotation_IDs:CG3556-PA,GB_protein:AAF45949.1,REFSEQ:NP_572164,GB_protein:AAF45949,FlyMine:FBpp0070642,modMine:FBpp0070642; MD5=6cdc0015212cb63b32732b69a43be7c5; length=595; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=X:join(4425343..4426711,4426889..4427084,4427153..4427230,4427294..4427376,4427558..4427619); ID=FBpp0301042; name=CG3556-PB; parent=FBgn0029708,FBtr0308916; dbxref=FlyBase:FBpp0301042,FlyBase_Annotation_IDs:CG3556-PB,REFSEQ:NP_001245529,GB_protein:AFH07243; MD5=6cdc0015212cb63b32732b69a43be7c5; length=595; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=X:join(4531310..4532678,4532856..4533051,4533120..4533197,4533261..4533343,4533525..4533586); ID=FBpp0070642; name=CG3556-PA; parent=FBgn0029708,FBtr0070674; dbxref=FlyBase:FBpp0070642,FlyBase_Annotation_IDs:CG3556-PA,GB_protein:AAF45949.1,REFSEQ:NP_572164,GB_protein:AAF45949,FlyMine:FBpp0070642,modMine:FBpp0070642; MD5=6cdc0015212cb63b32732b69a43be7c5; length=595; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=X:join(4531310..4532678,4532856..4533051,4533120..4533197,4533261..4533343,4533525..4533586); ID=FBpp0301042; name=CG3556-PB; parent=FBgn0029708,FBtr0308916; dbxref=FlyBase:FBpp0301042,FlyBase_Annotation_IDs:CG3556-PB,REFSEQ:NP_001245529,GB_protein:AFH07243; MD5=6cdc0015212cb63b32732b69a43be7c5; length=595; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=X:join(4531310..4532678,4532856..4533051,4533120..4533197,4533261..4533343,4533525..4533586); ID=FBpp0070642; name=CG3556-PA; parent=FBgn0029708,FBtr0070674; dbxref=FlyBase:FBpp0070642,FlyBase_Annotation_IDs:CG3556-PA,GB_protein:AAF45949.1,REFSEQ:NP_572164,GB_protein:AAF45949,FlyMine:FBpp0070642,modMine:FBpp0070642; MD5=6cdc0015212cb63b32732b69a43be7c5; length=595; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • type=protein; loc=X:join(4531310..4532678,4532856..4533051,4533120..4533197,4533261..4533343,4533525..4533586); ID=FBpp0301042; name=CG3556-PB; parent=FBgn0029708,FBtr0308916; dbxref=FlyBase:FBpp0301042,FlyBase_Annotation_IDs:CG3556-PB,REFSEQ:NP_001245529,GB_protein:AFH07243; MD5=6cdc0015212cb63b32732b69a43be7c5; length=595; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • Isoform of Q9W4K2, CG3556, isoform B OS=Drosophila melanogaster GN=CG3556 PE=4 SV=1 [DROME.fasta.20160308]
  • FBpp0070642 type=protein; loc=X:join(4531310..4532678,4532856..4533051,4533120..4533197,4533261..4533343,4533525..4533586); ID=FBpp0070642; name=CG3556-PA; parent=FBgn0029708,FBtr0070674; dbxref=FlyBase:FBpp0070642,FlyBase_Annotation_IDs:CG3556-PA,GB_protein:AAF45949.1,REFSEQ:NP_572164,GB_protein:AAF45949,FlyMine:FBpp0070642,modMine:FBpp0070642; MD5=6cdc0015212cb63b32732b69a43be7c5; length=595; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • FBpp0301042 type=protein; loc=X:join(4531310..4532678,4532856..4533051,4533120..4533197,4533261..4533343,4533525..4533586); ID=FBpp0301042; name=CG3556-PB; parent=FBgn0029708,FBtr0308916; dbxref=FlyBase:FBpp0301042,FlyBase_Annotation_IDs:CG3556-PB,REFSEQ:NP_001245529,GB_protein:AFH07243; MD5=6cdc0015212cb63b32732b69a43be7c5; length=595; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=X:join(4531310..4532678,4532856..4533051,4533120..4533197,4533261..4533343,4533525..4533586); ID=FBpp0070642; name=CG3556-PA; parent=FBgn0029708,FBtr0070674; dbxref=FlyBase:FBpp0070642,FlyBase_Annotation_IDs:CG3556-PA,GB_protein:AAF45949.1,REFSEQ:NP_572164,GB_protein:AAF45949,UniProt/Swiss-Prot:Q9W4K2,FlyMine:FBpp0070642,modMine:FBpp0070642; MD5=6cdc0015212cb63b32732b69a43be7c5; length=595; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
  • type=protein; loc=X:join(4531310..4532678,4532856..4533051,4533120..4533197,4533261..4533343,4533525..4533586); ID=FBpp0301042; name=CG3556-PB; parent=FBgn0029708,FBtr0308916; dbxref=FlyBase:FBpp0301042,FlyBase_Annotation_IDs:CG3556-PB,REFSEQ:NP_001245529,GB_protein:AFH07243,UniProt/Swiss-Prot:Q9W4K2; MD5=6cdc0015212cb63b32732b69a43be7c5; length=595; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 595 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: cobalamin transport [IEA]
    Molecular Function: cobalamin binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSLSSPPWL LLLVLFFFAN GSATVVSLAE NVTLATLPST SPISVSFSTT SSVVAPISTE  60
   61 LENQTASSSN LNTNNEASDE QTGNSNSNTS SHSRNINGLP SSNSNIDNAN SNSSSVSSLS 120
  121 TTTSAISGVD QQESLILATP TALNGSGTPP EHQTIGQAPP TKGEQEAILR ALDWLKEKRA 180
  181 SDYGWGNDTH VVILAKELSG GRDPNDSVDG HVQVIQELED TLSVKEMEIE ILAMLDRHHT 240
  241 LPKPLDLDKL ARYVLALGSL CKDPKHFHGH DLVATLQHHE PAQDIEFALT TLSACSSAAH 300
  301 VRKRQIRRLL DIASGVTDQS VDAIAMVILA LRCIVTDHRH RHLQHFVRRP ARGLATLQDQ 360
  361 RGSFGSLRST ALAMQALQDL EYDPAGHWNR TAASRYILSR QRADGGWSEE PLQDGQEPDI 420
  421 GVGLTADIIL ALGWKGLGAV RALQCDHVIR ESSDPTENGE PKLAVPFGLS SSAEESDAKN 480
  481 ISYTYTLWVG SNVTESFSLS LVSPKNTSFF KAMTQAAEMD PRFIFEAREW PNGHYVHTLY 540
  541 GKKEEPRGYH YWLLYRLPEL PDPNNTPGNQ LIAPVGVDEL MVEDGEHYLY WYKKL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..494] PSI-BLAST 91.69897 Structure of human OSC in complex with Lanosterol
    2 View Details [495..595] PSI-BLAST 72.69897 No description for 2bb5A was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
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