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Protein Overview: CG10803-PA

General Information:
Name(s) found: CG10803-PA / FBpp0070544 [FlyBase]
Description(s) found:
Found 20 descriptions.
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  • This gene is referred to in FlyBase by the symbol Dmel\CG10803 (CG10803, FBgn0029666). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is X:3379686..3382941. It has the cytological map location 3D4. An electronic pipeline based on InterPro domains suggests that it has the molecular function</span>: RNA binding. The biological processes in which it is involved are not known. 4 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 637 amino acids

    Gene Ontology:
    Cellular Component: ribonucleoprotein complex [IEA]
    Biological Process: NONE FOUND
    Molecular Function: RNA binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKGKGSSSL GSKESSGRPS TAVLVFKKCA RFADSSESAE IQQDGKEQLP ERQDSLDAKE  60
   61 SAGMEKEAIS NQPLKDEPSK DEPNQSEGTA ISTIPAIDKL RRFCFIGSTD EPVYTTPALD 120
  121 LVVENNFASL KELCSQVSED ELVECLLSVL GSEPNEEQPP RPDEPLLILA VFFTTCEDEK 180
  181 KRNAVRNRFT DLITSESDLL LFVQLVKRVQ KLLERKTPFN RTVRKAVLNW YGTKSLDRLL 240
  241 HFWSIGDGNR WPAHRDLLYR LHFRHANFLP EIIAALRLLS SSPKELSQWP DFLTPLTSFR 300
  301 ETIEGVVKLR LLTDPEQAIS IVKKLSLSWE HVPFHLLHDP RLAHFLIPHM SYEQLLQKWP 360
  361 RLSRLNSRVR PFAEQLLDKK KLKASNVPPV RLLLEDMRLR KPKKVVNQLV LPSSLKNKNT 420
  421 FKFQCATTSF QKASFLHSVY EISFGLNKAL GRRLHITLNL EQAYLGKYLS GPCRSLKYLD 480
  481 ALVALGFGYF RSDRKVTVEF WHDRSGKLKA LPWTNEMSVS EAKTCCENQK VGKVRQSLNE 540
  541 ILFRALLDMQ NTFDVFLVLV PGAARGNPEN NSKCLAALMD KYREKRNSNA KFIMVSLRQR 600
  601 QRSMIYSSGR NENLLELCSL DKHTPRLINA FVRNKFY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..637] PSI-BLAST 161.0 Ro autoantigen complexed with RNAs

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.0650247416983729 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.92

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle