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View Structure Prediction Details

Protein: CG10803-PA
Organism: Drosophila melanogaster
Length: 637 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG10803-PA.

Description E-value Query
Range
Subject
Range
gi|76636871 - gi|76636871|ref|XP_871247.1| PREDICTED: similar to TROVE domain family, member 2 isoform 2 [Bos taur...
592.0 [0..64] [634..1]

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Predicted Domain #1
Region A:
Residues: [1-637]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKGKGSSSL GSKESSGRPS TAVLVFKKCA RFADSSESAE IQQDGKEQLP ERQDSLDAKE  60
   61 SAGMEKEAIS NQPLKDEPSK DEPNQSEGTA ISTIPAIDKL RRFCFIGSTD EPVYTTPALD 120
  121 LVVENNFASL KELCSQVSED ELVECLLSVL GSEPNEEQPP RPDEPLLILA VFFTTCEDEK 180
  181 KRNAVRNRFT DLITSESDLL LFVQLVKRVQ KLLERKTPFN RTVRKAVLNW YGTKSLDRLL 240
  241 HFWSIGDGNR WPAHRDLLYR LHFRHANFLP EIIAALRLLS SSPKELSQWP DFLTPLTSFR 300
  301 ETIEGVVKLR LLTDPEQAIS IVKKLSLSWE HVPFHLLHDP RLAHFLIPHM SYEQLLQKWP 360
  361 RLSRLNSRVR PFAEQLLDKK KLKASNVPPV RLLLEDMRLR KPKKVVNQLV LPSSLKNKNT 420
  421 FKFQCATTSF QKASFLHSVY EISFGLNKAL GRRLHITLNL EQAYLGKYLS GPCRSLKYLD 480
  481 ALVALGFGYF RSDRKVTVEF WHDRSGKLKA LPWTNEMSVS EAKTCCENQK VGKVRQSLNE 540
  541 ILFRALLDMQ NTFDVFLVLV PGAARGNPEN NSKCLAALMD KYREKRNSNA KFIMVSLRQR 600
  601 QRSMIYSSGR NENLLELCSL DKHTPRLINA FVRNKFY

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 161.0
Match: 1yvpA
Description: Ro autoantigen complexed with RNAs
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.0650247416983729 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle