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Protein Overview: FBpp0070397, CG2...

General Information:
Name(s) found: FBpp0311475 [FlyBase]
CG2924-PB / FBpp0290017 [FlyBase]
FBpp0070397 [FlyBase]
CG2924-PA / FBpp0070396 [FlyBase]
Description(s) found:
Found 43 descriptions.
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  • type=protein; loc=X:complement(2159818..2159849,2159910..2159988,2160069..2160217,2160281..2160572,2160630..2160704,2160853..2161140,2161210..2161326,2162971..2163132); ID=FBpp0311475; name=CG2924-PD; parent=FBgn0023528,FBtr0345315; dbxref=FlyBase:FBpp0311475,FlyBase_Annotation_IDs:CG2924-PD; MD5=7ab54ccde45e8371ca44fc8bddf2b8fe; length=397; release=r5.56; species=Dmel; [FlyBase]
  • This gene is referred to in FlyBase by the symbol Dmel\CG2924 (CG2924, FBgn0023528). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is X:2159024..2164789. It has the cytological map location 2F2-2F3. It is reported to have molecular function</span>: ubiquitin-protein ligase activity. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process</span>: post-translational protein modification; regulation of protein metabolic process. 5 alleles are reported. No phenotypic data is available. It has 2 annotated transcripts and 2 annotated polypeptides. [FlyBase]
  • type=protein; loc=X:complement(2159818..2159849,2159910..2159988,2160069..2160217,2160281..2160572,2160630..2160704,2160853..2161140,2161210..2161326,2162971..2163132); ID=FBpp0070397; name=CG2924-PC; parent=FBgn0023528,FBtr0070413; dbxref=FlyBase:FBpp0070397,FlyBase_Annotation_IDs:CG2924-PC,GB_protein:AAF45767.1,REFSEQ:NP_569994,GB_protein:AAF45767; MD5=7ab54ccde45e8371ca44fc8bddf2b8fe; length=397; release=r5.56; species=Dmel; [FlyBase]
  • This gene is referred to in FlyBase by the symbol Dmel\CG2924 (CG2924, FBgn0023528). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is X:2159024..2164789. It has the cytological map location 2F2-2F3. It is reported to have molecular function</span>: ubiquitin-protein ligase activity. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process</span>: post-translational protein modification; regulation of protein metabolic process. 5 alleles are reported. No phenotypic data is available. It has 2 annotated transcripts and 2 annotated polypeptides. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 397 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: regulation of protein metabolic process [IEA]
    post-translational protein modification [IEA]
    Molecular Function: ubiquitin-protein ligase activity [NAS]
    small conjugating protein ligase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MACLNTLKQE IKTLEKIFPK NHERFQILNS SVDELLCRFI DKNGKRYDIH ANITETYPSS  60
   61 PPVWFAESEE TSVTNAVQIL SNTNGRDNHV INQVGILLRE LCRLHNVPLP PDIDNLALPL 120
  121 QTPPPSASPL RCEQRPGGGG AGGGGGPHGN EETDSDQEEI EDPIGESEQE SEGDEDLPLE 180
  181 MDDVRSTSKK DDMEVEHLAT LEKLRQSQRQ DYLKGSVSGS VQATDRLMKE LRDIYRSDAF 240
  241 KKNMYSIELV NESIYEWNIR LKSVDPDSPL HSDLQMLKEK EGKDSILLNI LFKETYPFEP 300
  301 PFVRVVHPII SGGYVLIGGA ICMELLTKQG WSSAYTVEAV IMQIAATLVK GKARIQFGAT 360
  361 KALTQGQYSL ARAQQSFKSL VQIHEKNGWF TPPKEDG

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..216] FFAS03 0.99 The Structure of a Class II ubiquitin-conjugating enzyme, Ubc1.
    2 View Details [217..397] PSI-BLAST 35.522879 Structure of Human Ubiquitin-Conjugating Enzyme (UBCi) Involved in Embryo Attachment and Implantation


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.69

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle