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Protein Overview: FBpp0310569, CG4...

General Information:
Name(s) found: FBpp0310569 [FlyBase]
CG4061-PA / FBpp0070316 [FlyBase]
Description(s) found:
Found 31 descriptions.
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  • type=protein; loc=X:1967744..1968829; ID=FBpp0310569; name=CG4061-PB; parent=FBgn0025630,FBtr0344156; dbxref=FlyBase:FBpp0310569,FlyBase_Annotation_IDs:CG4061-PB; MD5=8bf0f26db71bddaf714f1272c8bb1740; length=361; release=r5.56; species=Dmel; [FlyBase]
  • This gene is referred to in FlyBase by the symbol Dmel\CG4061 (CG4061, FBgn0025630). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is X:1966446..1968923. It has the cytological map location 2C10. Based on sequence similarity, it is predicted to have molecular function</span>: RNA-3'-phosphate cyclase activity. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process</span>: RNA processing. 6 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 361 amino acids

    Gene Ontology:
    Cellular Component: nucleus [ISS]
    nucleoplasm [IEA]
    Biological Process: RNA processing [IEA]
    Molecular Function: RNA-3'-phosphate cyclase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDAEKMLEID GSYLEGGGQA LRNALSLSCI LGKPVRVVKI RASRPSPGLS HQHLHGLNLL  60
   61 RDITNADVVG NYLLSSTVEF TPRTILDNTY RVETHTAASI TLIYQMALPV LLFAGRPSRL 120
  121 IVSGGTNVDF APPVEYMQEV LLPNLKHFGV SFDLKVQRYG FYPRGQGRCQ LDVQPVTKLN 180
  181 SGKLVAFGRI KSVSGVAYCA GRLPVNIAID MQQTAQREIH RLWPSQQCSI EPIKHSRQKA 240
  241 FHNGAGILMT VNTTSDVVLG ASALGKKRID GHVLGSEASC QLGDYMRKQV CVDDYMQDQL 300
  301 IIYMALAVGR STMRTGKLTN HTRTAINVAE QMTGVKFDVA MEPGGQMLVS CKGLGHVNKL 360
  361 I

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..361] PSI-BLAST 109.0 RNA 3'-terminal phosphate cyclase, RPTC, insert domain; RNA 3'-terminal phosphate cyclase, RPTC

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  2.54689525592227 bayes_pls_golite062009
  • transferase activity
    		•  1.7007536630883 bayes_pls_golite062009
  • transferase activity, transferring alkyl or aryl (other than methyl) groups
    		•  1.24131488513793 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.88

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle