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Protein Overview: mRpL16-PA, FBpp0...

General Information:
Name(s) found: FBpp0304831 [FlyBase]
mRpL16-PA / FBpp0070301 [FlyBase]
Description(s) found:
Found 28 descriptions.
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  • type=protein; loc=X:join(1784380..1784428,1784511..1784576,1784646..1785262); ID=FBpp0304831; name=mRpL16-PB; parent=FBgn0023519,FBtr0332579; dbxref=REFSEQ:NP_001259148,GB_protein:AGB94994,FlyBase:FBpp0304831,FlyBase_Annotation_IDs:CG3109-PB; MD5=c519639fb4d1b99e2695e5b8ed21ab51; length=243; release=r5.56; species=Dmel; [FlyBase]
  • The gene mitochondrial ribosomal protein L16 is referred to in FlyBase by the symbol Dmel\mRpL16 (CG3109, FBgn0023519). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is X:1784332..1785313. It has the cytological map location 2B14. Based on sequence similarity, it is predicted to have molecular function</span>: structural constituent of ribosome. Based on sequence similarity, it is predicted to be involved in the biological process</span>: translation. 7 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 243 amino acids

    Gene Ontology:
    Cellular Component: mitochondrial large ribosomal subunit [ISS]
    Biological Process: translation [ISS]
    Molecular Function: structural constituent of ribosome [ISS]
    rRNA binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSLKLVSQL FKQSLASGNM AIVNTAGLKY FAPPIKYQNV EQPERPKLRV IERQPQLPPN  60
   61 IRPPKMQKRL RYMRGPEMVH NTLLHKQYAI VATGGGRLRW GHYEMMRLTI GRKMNVNTMF 120
  121 ATWRVPAPWQ PITKKGQGQR MGGGKGAIDH YVTPIKAGRV IVEIAGKCEF VEVKQFLQQV 180
  181 ANQLPFQATV VSQEMLDEQR VAEEEQTRQN ENPFTMKYVI QNNLSGCHRW LSPVDHKWFG 240
  241 KHL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..243] PSI-BLAST 24.045757 No description for 2ftcI was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.66

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle