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Protein Overview: Or1a-PA

General Information:
Name(s) found: Or1a-PA / FBpp0070069 [FlyBase]
Description(s) found:
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  • gi|24638847|ref|NP_525029.2| odorant receptor 1a [Drosophila melanogaster] [NCBI NR]
  • gi|22831408|gb|AAF45495.2| odorant receptor 1a [Drosophila melanogaster] [NCBI NR]
  • gi|14285651|sp|Q9W5G6.2|OR1A_DROME RecName: Full=Putative odorant receptor 1a [NCBI NR]
  • Odorant receptor 1a OS=Drosophila melanogaster GN=Or1a PE=2 SV=2 [Swiss-Prot]
  • The gene Odorant receptor 1a is referred to in FlyBase by the symbol Dmel\Or1a (CG17885, FBgn0029521). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is X:209156..210590. It has the cytological map location 1A2. Based on sequence similarity, it is predicted to have molecular function</span>: olfactory receptor activity. There is experimental evidence that it is involved in the biological process</span>: olfactory behavior. 2 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
  • >CG17885-PA translation from_gene[CG17885 Or1a FBgn0029521] seq_release:3 mol_weight=44961 cds_boundaries:(X:72,561..73,992[+]) aa_length:392 transcript_info:[CG17885-RA seq_release:3] gene_info:[gene symbol:Or1a FBgn0029521 gene_boundaries:(X:72,561.. [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q9W5G6) Putative odorant receptor 1a [DrosMelano7227.FASTAC.txt]
  • CG17885-PA [Drosophila melanogaster]gi|24638847|ref|NP_525029.2| CG17885-PA [Drosophila melanogaster]gi|14285651|sp|Q9W5G6|OR1A_DROME Putative odorant receptor 1a [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=X:join(209156..209661,209808..210411,210522..210590); ID=FBpp0070069; name=Or1a-PA; parent=FBgn0029521,FBtr0070070; dbxref=FlyBase:FBpp0070069,FlyBase_Annotation_IDs:CG17885-PA,GB_protein:AAF45495.2,REFSEQ:NP_525029,GB_protein:AAF45495; [fly-100309-contam.fasta]
  • Putative odorant receptor 1a [nr-271106-contam.fasta]
  • Odorant receptor 1a CG17885-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • CG17885-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=X:join(209156..209661,209808..210411,210522..210590); ID=FBpp0070069; name=Or1a-PA; parent=FBgn0029521,FBtr0070070; dbxref=FlyBase:FBpp0070069,FlyBase_Annotation_IDs:CG17885-PA,GB_protein:AAF45495.2,REFSEQ:NP_525029,GB_protein:AAF45495; MD5=3a17ad21745d414ae6bcb7a2cf57d59c; length=392; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=X:join(209156..209661,209808..210411,210522..210590); ID=FBpp0070069; name=Or1a-PA; parent=FBgn0029521,FBtr0070070; dbxref=FlyBase:FBpp0070069,FlyBase_Annotation_IDs:CG17885-PA,GB_protein:AAF45495.2,REFSEQ:NP_525029,GB_protein:AAF45495; MD5=3a17ad21745d414ae6bcb7a2cf57d59c; length=392; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • Putative odorant receptor 1a OS=Drosophila melanogaster GN=Or1a PE=3 SV=2 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=X:join(209156..209661,209808..210411,210522..210590); ID=FBpp0070069; name=Or1a-PA; parent=FBgn0029521,FBtr0070070; dbxref=FlyBase:FBpp0070069,FlyBase_Annotation_IDs:CG17885-PA,GB_protein:AAF45495.2,REFSEQ:NP_525029,GB_protein:AAF45495,FlyMine:FBpp0070069,modMine:FBpp0070069; MD5=3a17ad21745d414ae6bcb7a2cf57d59c; length=392; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=X:join(315123..315628,315775..316378,316489..316557); ID=FBpp0070069; name=Or1a-PA; parent=FBgn0029521,FBtr0070070; dbxref=FlyBase:FBpp0070069,FlyBase_Annotation_IDs:CG17885-PA,GB_protein:AAF45495.2,REFSEQ:NP_525029,GB_protein:AAF45495,FlyMine:FBpp0070069,modMine:FBpp0070069; MD5=3a17ad21745d414ae6bcb7a2cf57d59c; length=392; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=X:join(315123..315628,315775..316378,316489..316557); ID=FBpp0070069; name=Or1a-PA; parent=FBgn0029521,FBtr0070070; dbxref=FlyBase:FBpp0070069,FlyBase_Annotation_IDs:CG17885-PA,GB_protein:AAF45495.2,REFSEQ:NP_525029,GB_protein:AAF45495,FlyMine:FBpp0070069,modMine:FBpp0070069; MD5=3a17ad21745d414ae6bcb7a2cf57d59c; length=392; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • FBpp0070069 type=protein; loc=X:join(315123..315628,315775..316378,316489..316557); ID=FBpp0070069; name=Or1a-PA; parent=FBgn0029521,FBtr0070070; dbxref=FlyBase:FBpp0070069,FlyBase_Annotation_IDs:CG17885-PA,GB_protein:AAF45495.2,REFSEQ:NP_525029,GB_protein:AAF45495,FlyMine:FBpp0070069,modMine:FBpp0070069; MD5=3a17ad21745d414ae6bcb7a2cf57d59c; length=392; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=X:join(315123..315628,315775..316378,316489..316557); ID=FBpp0070069; name=Or1a-PA; parent=FBgn0029521,FBtr0070070; dbxref=FlyBase:FBpp0070069,FlyBase_Annotation_IDs:CG17885-PA,GB_protein:AAF45495.2,REFSEQ:NP_525029,GB_protein:AAF45495,UniProt/Swiss-Prot:Q9W5G6,FlyMine:FBpp0070069,modMine:FBpp0070069; MD5=3a17ad21745d414ae6bcb7a2cf57d59c; length=392; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 392 amino acids

    Gene Ontology:
    Cellular Component: membrane [IEA]
    integral to membrane [ISS]
    Biological Process: sensory perception of smell [IEA][ISS]
    olfactory behavior [IMP]
    Molecular Function: odorant binding [IEA]
    olfactory receptor activity [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKLIEVFLG NLWTQRFTFA RMGLDLQPDK KGNVLRSPLL YCIMCLTTSF ELCTVCAFMV  60
   61 QNRNQIVLCS EALMHGLQMV SSLLKMAIFL AKSHDLVDLI QQIQSPFTEE DLVGTEWRSQ 120
  121 NQRGQLMAAI YFMMCAGTSV SFLLMPVALT MLKYHSTGEF APVSSFRVLL PYDVTQPHVY 180
  181 AMDCCLMVFV LSFFCCSTTG VDTLYGWCAL GVSLQYRRLG QQLKRIPSCF NPSRSDFGLS 240
  241 GIFVEHARLL KIVQHFNYSF MEIAFVEVVI ICGLYCSVIC QYIMPHTNQN FAFLGFFSLV 300
  301 VTTQLCIYLF GAEQVRLEAE RFSRLLYEVI PWQNLPPKHR KLFLFPIERA QRETVLGAYF 360
  361 FELGRPLLVW IFRTAGSFTT LMNALYAKYE TH

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..196] MSA 3.315995 View MSA. No confident structure predictions are available.
    2 View Details [197..392] MSA 11.319993 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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