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Protein Overview: Slip1-PA

General Information:
Name(s) found: Slip1-PA / FBpp0088159 [FlyBase]
Description(s) found:
Found 21 descriptions.
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  • The gene Slip1 is referred to in FlyBase by the symbol Dmel\Slip1 (CG1783, FBgn0024728). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 4:684214..690510. It has the cytological map location 102D4. There is experimental evidence that it has the molecular function</span>: protein binding; potassium channel regulator activity. The biological processes in which it is involved are not known. 3 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 767 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: biological_process [ND]
    Molecular Function: protein binding [IPI]
    potassium channel regulator activity [IDA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSIADVEYEY VVLKINGYDI SHLSRYEAVQ KFLQSKETLV VEIRRQKHNA LDLELKHGSN  60
   61 AKISKVDNPG ELSVLTDKSA EGTITAASAS QQINCPSSTS LKEIETKTPV VLTLRARSHE 120
  121 DRLGSLQAAS KETQTQSVVG TDVLKDNDLV NTITDNFIEH EHHLFEQCLE PEIDIEEVTL 180
  181 VKGVEQSSSN QIGLIVTSSG IQQSSTDTNK GDILGNVLEH SEDVFISGVQ PESIAYRDGR 240
  241 LRQGDQILRI NGLDVKNQEE LETQIARSST SVTLLVSRIL YPEDDDDEDI HFEYANTFLP 300
  301 DDYTNVVDKL DKVLLTHVKS LEELSNKSAM QSDECYHIPE KNSSDSNVKI SSLAKNIIEQ 360
  361 STKSCSKIKL RPNANLDYKK KFNLPLSQEE VHLQYEYDES EHIYETIPED SESEPVYCSP 420
  421 YQRSNDKTSI GCSSPIASRP AESLERTMQQ QTQRVAQWLG LKPQYQKTRQ TLVGRPPPLK 480
  481 LVQQPTCSRV FTLRSTLTNT SASSSSGVAY SSYGQNNVVT GNAAAPGEEV DNSSSAYNTG 540
  541 DSNNSASPHQ NTTNPDEAIA TGRKLDSTVI DSPNDHLDAT GVSTMLLLPF GKSGRIGLCS 600
  601 SNLPTAYVSE RYTNVGSENE IHPLKSDIEI LRVKPTDDSY SHCPQFNAPN LSSYHFVSSQ 660
  661 EVANRCHIST SLQKNATLLN GESAEEIPMV WKVKRRPDGT RYIVKRPVRN RPQVALRKNM 720
  721 RYNEVTTTED DTISEVKIGR YWTKEERKRH IERAREKRHH QTQQQQQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..151] PSI-BLAST 8.69897 Structural Insights into the Inter-domain Chaperoning of Tandem PDZ Domains in Glutamate Receptor Interacting Proteins
    2 View Details [152..383] PSI-BLAST 17.221849 solution structure of the split PH-PDZ Supramodule of alpha-Syntrophin
    3 View Details [384..478] deduced N/A No confident structure predictions are available.
    4 View Details [479..685] MSA 1.294997 View MSA. No confident structure predictions are available.
    5 View Details [686..767] MSA 2.175995 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.979645318021517 bayes_pls_golite062009
  • protein binding
    		•  0.89528982121944 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.
    4 No functions predicted.
    5 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle