| Protein: | Slip1-PA |
| Organism: | Drosophila melanogaster |
| Length: | 767 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Slip1-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
384.0 | [0..2] | [766..270] |
|
Region A: Residues: [1-151] |
1 11 21 31 41 51
| | | | | |
1 MSIADVEYEY VVLKINGYDI SHLSRYEAVQ KFLQSKETLV VEIRRQKHNA LDLELKHGSN 60
61 AKISKVDNPG ELSVLTDKSA EGTITAASAS QQINCPSSTS LKEIETKTPV VLTLRARSHE 120
121 DRLGSLQAAS KETQTQSVVG TDVLKDNDLV N
|
| Detection Method: |  |
| Confidence: | 8.69897 |
| Match: | 1p1dA |
| Description: | Structural Insights into the Inter-domain Chaperoning of Tandem PDZ Domains in Glutamate Receptor Interacting Proteins |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.979645318021517 | bayes_pls_golite062009 |
| protein binding | 0.89528982121944 | bayes_pls_golite062009 |
|
Region A: Residues: [152-383] |
1 11 21 31 41 51
| | | | | |
1 TITDNFIEHE HHLFEQCLEP EIDIEEVTLV KGVEQSSSNQ IGLIVTSSGI QQSSTDTNKG 60
61 DILGNVLEHS EDVFISGVQP ESIAYRDGRL RQGDQILRIN GLDVKNQEEL ETQIARSSTS 120
121 VTLLVSRILY PEDDDDEDIH FEYANTFLPD DYTNVVDKLD KVLLTHVKSL EELSNKSAMQ 180
181 SDECYHIPEK NSSDSNVKIS SLAKNIIEQS TKSCSKIKLR PNANLDYKKK FN
|
| Detection Method: | |
| Confidence: | 17.221849 |
| Match: | 1z87A |
| Description: | solution structure of the split PH-PDZ Supramodule of alpha-Syntrophin |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [384-478] |
1 11 21 31 41 51
| | | | | |
1 LPLSQEEVHL QYEYDESEHI YETIPEDSES EPVYCSPYQR SNDKTSIGCS SPIASRPAES 60
61 LERTMQQQTQ RVAQWLGLKP QYQKTRQTLV GRPPP
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [479-685] |
1 11 21 31 41 51
| | | | | |
1 LKLVQQPTCS RVFTLRSTLT NTSASSSSGV AYSSYGQNNV VTGNAAAPGE EVDNSSSAYN 60
61 TGDSNNSASP HQNTTNPDEA IATGRKLDST VIDSPNDHLD ATGVSTMLLL PFGKSGRIGL 120
121 CSSNLPTAYV SERYTNVGSE NEIHPLKSDI EILRVKPTDD SYSHCPQFNA PNLSSYHFVS 180
181 SQEVANRCHI STSLQKNATL LNGESAE
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [686-767] |
1 11 21 31 41 51
| | | | | |
1 EIPMVWKVKR RPDGTRYIVK RPVRNRPQVA LRKNMRYNEV TTTEDDTISE VKIGRYWTKE 60
61 ERKRHIERAR EKRHHQTQQQ QQ
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
