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Protein Overview: CG1890-PA

General Information:
Name(s) found: CG1890-PA / FBpp0085195 [FlyBase]
Description(s) found:
Found 21 descriptions.
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  • This gene is referred to in FlyBase by the symbol Dmel\CG1890 (CG1890, FBgn0039869). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:27569228..27569970. It has the cytological map location 100D2. An electronic pipeline based on InterPro domains suggests that it has the molecular function</span>: unfolded protein binding. Based on sequence similarity, it is predicted to be involved in the biological process</span>: tubulin complex assembly. 5 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 110 amino acids

    Gene Ontology:
    Cellular Component: microtubule [IEA]
    Biological Process: tubulin complex assembly [ISS]
    Molecular Function: unfolded protein binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTDPRIRQLV IKSGVVRRLT REKYCYAKEV LTEQARLEKL RGDGADDHVL RKQEEVIQEC  60
   61 IMMVPDSKRR LQKEYEVLEK YLADEQDLIE TDSYKKAAEI LKDAKAELET

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..110] PSI-BLAST 25.0 Tubulin chaperone cofactor A

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • chaperone binding
    		•  1.47792074338377 bayes_pls_golite062009
  • binding
    		•  1.45739561719433 bayes_pls_golite062009
  • protein binding
    		•  1.10534436186662 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle