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Protein Overview: dgt1-PA

General Information:
Name(s) found: dgt1-PA / FBpp0084893 [FlyBase]
Description(s) found:
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  • gi|23172607|gb|AAF56956.2| dim gamma-tubulin 1 [Drosophila melanogaster] [NCBI NR]
  • gi|21358561|ref|NP_651737.1| dim gamma-tubulin 1 [Drosophila melanogaster] [NCBI NR]
  • gi|16768970|gb|AAL28704.1| LD12439p [Drosophila melanogaster] [NCBI NR]
  • The gene dim Ã?&#142;Ã?³-tubulin 1 is referred to in FlyBase by the symbol Dmel\dgt1 (CG18041, FBgn0039710). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:25680412..25683191. It has the cytological map location 99C4. An electronic pipeline based on InterPro domains suggests that it has the molecular function</span>: magnesium ion binding; inorganic diphosphatase activity. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process</span>: phosphate metabolic process. 6 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
  • >CG18041-PA translation from_gene[CG18041 CG18041 FBgn0039710] seq_release:3 mol_weight=56006 cds_boundaries:(3R:25,669,949..25,672,485[-]) aa_length:484 transcript_info:[CG18041-RA seq_release:3] gene_info:[gene symbol:CG18041 FBgn0039710 gene_boundar [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q9VAF4) CG18041-PA (LD12439p) [DrosMelano7227.FASTAC.txt]
  • CG18041-PA [Drosophila melanogaster]gi|16768970|gb|AAL28704.1| LD12439p [Drosophila melanogaster]gi|21358561|ref|NP_651737.1| CG18041-PA [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=3R:complement(25680580..25680765,25681675..25682075,25682133..25682296,25682363..25682555,25682609..25683119); ID=FBpp0084893; name=dgt1-PA; parent=FBgn0039710,FBtr0085527; dbxref=FlyBase:FBpp0084893,FlyBase_Annotation_IDs:CG18041-PA,GB_ [fly-100309-contam.fasta]
  • CG18041-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • LD12439p [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=3R:complement(25680580..25680765,25681675..25682075,25682133..25682296,25682363..25682555,25682609..25683119); ID=FBpp0084893; name=dgt1-PA; parent=FBgn0039710,FBtr0085527; dbxref=FlyBase:FBpp0084893,FlyBase_Annotation_IDs:CG18041-PA,GB_protein:AAF56956.2,REFSEQ:NP_651737,GB_protein:AAF56956; MD5=7b86b0599914afeb6409b4e9fab86d2e; length=484; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=3R:complement(25680580..25680765,25681675..25682075,25682133..25682296,25682363..25682555,25682609..25683119); ID=FBpp0084893; name=dgt1-PA; parent=FBgn0039710,FBtr0085527; dbxref=FlyBase:FBpp0084893,FlyBase_Annotation_IDs:CG18041-PA,GB_protein:AAF56956.2,REFSEQ:NP_651737,GB_protein:AAF56956; MD5=7b86b0599914afeb6409b4e9fab86d2e; length=484; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • Dim gamma-tubulin 1 OS=Drosophila melanogaster GN=dgt1 PE=1 SV=2 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=3R:complement(25680580..25680765,25681675..25682075,25682133..25682296,25682363..25682555,25682609..25683119); ID=FBpp0084893; name=dgt1-PA; parent=FBgn0039710,FBtr0085527; dbxref=FlyBase:FBpp0084893,FlyBase_Annotation_IDs:CG18041-PA,GB_protein:AAF56956.2,REFSEQ:NP_651737,GB_protein:AAF56956,FlyMine:FBpp0084893,modMine:FBpp0084893; MD5=7b86b0599914afeb6409b4e9fab86d2e; length=484; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • Dim gamma-tubulin 1 OS=Drosophila melanogaster GN=dgt1 PE=2 SV=2 [UniProt_D_Melanogaster_07132012_07-13-2012_reversed.fasta]
  • type=protein; loc=3R:complement(join(29856887..29857397,29856641..29856833,29856411..29856574,29855953..29856353,29854858..29855043)); ID=FBpp0084893; name=dgt1-PA; parent=FBgn0039710,FBtr0085527; dbxref=FlyBase:FBpp0084893,FlyBase_Annotation_IDs:CG18041-PA,GB_protein:AAF56956.2,REFSEQ:NP_651737,GB_protein:AAF56956,FlyMine:FBpp0084893,modMine:FBpp0084893; MD5=7b86b0599914afeb6409b4e9fab86d2e; length=484; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=3R:complement(join(29856887..29857397,29856641..29856833,29856411..29856574,29855953..29856353,29854858..29855043)); ID=FBpp0084893; name=dgt1-PA; parent=FBgn0039710,FBtr0085527; dbxref=FlyBase:FBpp0084893,FlyBase_Annotation_IDs:CG18041-PA,GB_protein:AAF56956.2,REFSEQ:NP_651737,GB_protein:AAF56956,FlyMine:FBpp0084893,modMine:FBpp0084893; MD5=7b86b0599914afeb6409b4e9fab86d2e; length=484; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • Isoform of A0A0B4LHU7, Dim gamma-tubulin 1, isoform A OS=Drosophila melanogaster GN=dgt1 PE=1 SV=2 [DROME.fasta.20160308]
  • FBpp0084893 type=protein; loc=3R:complement(join(29856887..29857397,29856641..29856833,29856411..29856574,29855953..29856353,29854858..29855043)); ID=FBpp0084893; name=dgt1-PA; parent=FBgn0039710,FBtr0085527; dbxref=FlyBase:FBpp0084893,FlyBase_Annotation_IDs:CG18041-PA,GB_protein:AAF56956.2,REFSEQ:NP_651737,GB_protein:AAF56956,FlyMine:FBpp0084893,modMine:FBpp0084893; MD5=7b86b0599914afeb6409b4e9fab86d2e; length=484; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=3R:complement(join(29856887..29857397,29856641..29856833,29856411..29856574,29855953..29856353,29854858..29855043)); ID=FBpp0084893; name=dgt1-PA; parent=FBgn0039710,FBtr0085527; dbxref=FlyBase:FBpp0084893,FlyBase_Annotation_IDs:CG18041-PA,GB_protein:AAF56956.2,REFSEQ:NP_651737,GB_protein:AAF56956,UniProt/TrEMBL:Q9VAF4,FlyMine:FBpp0084893,modMine:FBpp0084893; MD5=7b86b0599914afeb6409b4e9fab86d2e; length=484; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 484 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IEA]
    Biological Process: phosphate metabolic process [IEA]
    Molecular Function: magnesium ion binding [IEA]
    inorganic diphosphatase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSFSPNQLR QCARFTGTPC TPDKEHQLRE QIHSELVKIK YCANPTYECS LMRIEGYEYC  60
   61 IRHILRDPRS NFRQCSHVYS NGRKCINAVA KYDNKKELIL TTLCFEHNRQ TQLQKTHMNV 120
  121 GRIRSRVETN ETLLHSLSSH INVEDIKPEV KKIERDDDEI DVVSPHVTPF VTQDHRNSIG 180
  181 HVVESSRKRR RILDYASDSS SNDADPPCLR NTAQDIEFYE SDHESIDSED DDPLKHAGVF 240
  241 TRAEAVKIAE TKLIKLQGLY REQISYLQNV LRQRRRKYLH DIRRERELYC SIHDQLKDTP 300
  301 HERKLYEQLK ALNSYHRRQG VEAVLYKKLK EKRARDALYA AKSSSNPKCV FTEGGVKCGE 360
  361 RTLPCCKHCR KHILEDKRQV LFRACGVERS GVVCQEPVAS ILEDSSCVLH LTVAPAKRQY 420
  421 IQKKCESETE EEETQSTSLI STIKKEEEDP SDKLYTSQAL NVTTAHGEDN KGDVKPREYA 480
  481 PNRS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..107] MSA 1.017976 View MSA. No confident structure predictions are available.
    2 View Details [108..227] MSA 1.023988 View MSA. No confident structure predictions are available.
    3 View Details [228..484] MSA 5.035975 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle