YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: CG1972-PA

General Information:
Name(s) found: CG1972-PA / FBpp0084842 [FlyBase]
Description(s) found:
Found 22 descriptions.
SHOW ALL
  • This gene is referred to in FlyBase by the symbol Dmel\CG1972 (CG1972, FBgn0039691). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:25571076..25573239. It has the cytological map location 99B10. An electronic pipeline based on InterPro domains suggests that it has the molecular function</span>: hydrolase activity. Based on sequence similarity, it is predicted to be involved in the biological process</span>: mRNA polyadenylation; mRNA cleavage. One allele is reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 597 amino acids

    Gene Ontology:
    Cellular Component: mRNA cleavage and polyadenylation specificity factor complex [ISS]
    Biological Process: mRNA polyadenylation [ISS]
    mRNA cleavage [ISS]
    Molecular Function: hydrolase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPDIKITPLG AGQDVGRSCL LLSMGGKNIM LDCGMHMGYN DERRFPDFSY IVPEGPITSH  60
   61 IDCVIISHFH LDHCGALPYM SEIVGYTGPI YMTHPTKAIA PILLEDMRKV AVERKGESNF 120
  121 FTTQMIKDCM KKVIPVTLHQ SMMVDTDLEI KAYYAGHVLG AAMFWIKVGS QSVVYTGDYN 180
  181 MTPDRHLGAA WIDKCRPDLL ISESTYATTI RDSKRCRERD FLKKVHECVA KGGKVLIPVF 240
  241 ALGRAQELCI LLETYWERMN LKYPIYFALG LTEKANTYYK MFITWTNQKI RKTFVHRNMF 300
  301 DFKHIKPFDK AYIDNPGAMV VFATPGMLHA GLSLQIFKKW APNENNMVIM PGYCVQGTVG 360
  361 NKILGGAKKV EFENRQVVEV KMAVEYMSFS AHADAKGIMQ LIQNCEPKNV MLVHGEAGKM 420
  421 KFLRSKIKDE FNLETYMPAN GETCVISTPV KIPVDASVSL LKAEARSYNA QPPDPKRRRL 480
  481 IHGVLVMKDN RIMLQNLTDA LKEIGINRHV MRFTSKVKMD DSGPVIRTSE RLKTLLEEKL 540
  541 AGWTVTMQEN GSIAIESVEV KVEEDEKDPK QKNILISWTN QDEDIGAYIL NVLQNMC

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..449] PSI-BLAST 86.39794 No description for 2i7tA was found.
    2 View Details [450..597] MSA 3.197994 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.95

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle