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Protein Overview: CG34362-PA

General Information:
Name(s) found: CG34362-PA / FBpp0111495 [FlyBase]
Description(s) found:
Found 20 descriptions.
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  • This gene is referred to in FlyBase by the symbol Dmel\CG34362 (CG34362, FBgn0085391). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:23852334..23911484. It has the cytological map location 98B8-98C1. An electronic pipeline based on InterPro domains suggests that it has the molecular function</span>: nucleotide binding; nucleic acid binding. There is experimental evidence that it is involved in the biological process</span>: regulation of alternative nuclear mRNA splicing, via spliceosome. 8 alleles are reported. No phenotypic data is available. It has 3 annotated transcripts and 3 annotated polypeptides. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 505 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: regulation of alternative nuclear mRNA splicing, via spliceosome [IMP]
    Molecular Function: nucleic acid binding [IEA]
    nucleotide binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLAMPTLMMP ATAQMTLSAA HGKPYETKLL AIHQTHLQQQ QQQQAPAPPQ QQQQVQQSQQ  60
   61 QAPNGKQQSQ QMTIVTTQQQ QQQQHPQSQS PHQQQQSQQQ AAAAAAAAAA AAHHQQQQAV 120
  121 AAAVCAAQQQ AVVVQQQQQQ QYQIHSQQQS PQQQQVLCIS PKQEQFHIFV GDLSSEIETQ 180
  181 QLREAFTPFG EISDCRVVRD PQTLKSKGYG FVSFIKKSEA ESAITAMNGQ WLGSRSIRTN 240
  241 WATRKPPASK ENIKPLTFDE VYNQSSPSNC TVYVGGVNSA LTALSEEVLQ KTFAPYGAIQ 300
  301 EIRVFKDKGY AFVRFSTKEA ATHAIVGVHN TEINAQPVKC SWGKESGDPN NAQTIATQAL 360
  361 NSAAAAAAGF PYGVGAAAAA AAYGQQLAAT GCWYSPTPTY PASSATAAAV TPAAASAAAV 420
  421 QNQFLQGIQG YHFGQYGGYQ QGYMGMGVQI PATWQGVTQA QISPAQQLAT GVAGTAIPQA 480
  481 AGVVAYPIQQ FQVSPQVYPL LLQAQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..161] FFAS03 1.33 No description for 2j63A was found.
    2 View Details [162..358] PSI-BLAST 40.69897 Nuclear ribonucleoprotein A1 (RNP A1, UP1)
    3 View Details [359..505] PSI-BLAST 5.522879 Sec24

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  0.950788308762215 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.29562225149076 bayes_pls_golite062009
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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