| Protein: | CG34362-PA |
| Organism: | Drosophila melanogaster |
| Length: | 505 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG34362-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
330.0 | [0..2] | [502..54] |
|
Region A: Residues: [1-161] |
1 11 21 31 41 51
| | | | | |
1 MLAMPTLMMP ATAQMTLSAA HGKPYETKLL AIHQTHLQQQ QQQQAPAPPQ QQQQVQQSQQ 60
61 QAPNGKQQSQ QMTIVTTQQQ QQQQHPQSQS PHQQQQSQQQ AAAAAAAAAA AAHHQQQQAV 120
121 AAAVCAAQQQ AVVVQQQQQQ QYQIHSQQQS PQQQQVLCIS P
|
| Detection Method: |  |
| Confidence: | 1.33 |
| Match: | 2j63A |
| Description: | No description for 2j63A was found. |
|
Region A: Residues: [162-358] |
1 11 21 31 41 51
| | | | | |
1 KQEQFHIFVG DLSSEIETQQ LREAFTPFGE ISDCRVVRDP QTLKSKGYGF VSFIKKSEAE 60
61 SAITAMNGQW LGSRSIRTNW ATRKPPASKE NIKPLTFDEV YNQSSPSNCT VYVGGVNSAL 120
121 TALSEEVLQK TFAPYGAIQE IRVFKDKGYA FVRFSTKEAA THAIVGVHNT EINAQPVKCS 180
181 WGKESGDPNN AQTIATQ
|
| Detection Method: | |
| Confidence: | 40.69897 |
| Match: | 1l3kA |
| Description: | Nuclear ribonucleoprotein A1 (RNP A1, UP1) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.950788308762215 | bayes_pls_golite062009 |
| nucleic acid binding | 0.29562225149076 | bayes_pls_golite062009 |
|
Region A: Residues: [359-505] |
1 11 21 31 41 51
| | | | | |
1 ALNSAAAAAA GFPYGVGAAA AAAAYGQQLA ATGCWYSPTP TYPASSATAA AVTPAAASAA 60
61 AVQNQFLQGI QGYHFGQYGG YQQGYMGMGV QIPATWQGVT QAQISPAQQL ATGVAGTAIP 120
121 QAAGVVAYPI QQFQVSPQVY PLLLQAQ
|
| Detection Method: | |
| Confidence: | 5.522879 |
| Match: | 1m2vB |
| Description: | Sec24 |
Matching Structure (courtesy of the PDB): |
|
