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Protein Overview: Or98a-PA

General Information:
Name(s) found: Or98a-PA / FBpp0084595 [FlyBase]
Description(s) found:
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  • gi|24650735|ref|NP_524536.2| odorant receptor 98a [Drosophila melanogaster] [NCBI NR]
  • gi|23172470|gb|AAF56753.2| odorant receptor 98a [Drosophila melanogaster] [NCBI NR]
  • gi|14285647|sp|Q9VAZ3.2|OR98A_DROME RecName: Full=Putative odorant receptor 98a [NCBI NR]
  • Odorant receptor 98a OS=Drosophila melanogaster GN=Or98a PE=2 SV=2 [Swiss-Prot]
  • (Q9VAZ3) Putative odorant receptor 98a [Swiss-Prot]
  • The gene Odorant receptor 98a is referred to in FlyBase by the symbol Dmel\Or98a (CG5540, FBgn0039551). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:23671672..23672982. It has the cytological map location 98B4. There is experimental evidence that it has the molecular function</span>: olfactory receptor activity. Based on sequence similarity, it is predicted to be involved in the biological process</span>: sensory perception of smell. 3 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
  • >CG5540-PA translation from_gene[CG5540 Or98a FBgn0039551] seq_release:3 mol_weight=45437 cds_boundaries:(3R:23,661,037..23,662,344[+]) aa_length:397 transcript_info:[CG5540-RA seq_release:3] gene_info:[gene symbol:Or98a FBgn0039551 gene_boundaries:(3R [hmr_yeast5_DM3-1_pombe.fasta]
  • CG5540-PA [Drosophila melanogaster]gi|24650735|ref|NP_524536.2| CG5540-PA [Drosophila melanogaster]gi|14285647|sp|Q9VAZ3|O98A_DROME Putative odorant receptor 98a [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=3R:join(23671672..23672432,23672490..23672847,23672908..23672982); ID=FBpp0084595; name=Or98a-PA; parent=FBgn0039551,FBtr0085226; dbxref=FlyBase:FBpp0084595,FlyBase_Annotation_IDs:CG5540-PA,GB_protein:AAF56753.2,REFSEQ:NP_524536,GB_prote [fly-100309-contam.fasta]
  • Odorant receptor 98a CG5540-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • CG5540-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • Putative odorant receptor 98a [nr-271106-contam.fasta]
  • type=protein; loc=3R:join(23671672..23672432,23672490..23672847,23672908..23672982); ID=FBpp0084595; name=Or98a-PA; parent=FBgn0039551,FBtr0085226; dbxref=FlyBase:FBpp0084595,FlyBase_Annotation_IDs:CG5540-PA,GB_protein:AAF56753.2,REFSEQ:NP_524536,GB_protein:AAF56753; MD5=555bae13754cff3ae532c806528e2126; length=397; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=3R:join(23671672..23672432,23672490..23672847,23672908..23672982); ID=FBpp0084595; name=Or98a-PA; parent=FBgn0039551,FBtr0085226; dbxref=FlyBase:FBpp0084595,FlyBase_Annotation_IDs:CG5540-PA,GB_protein:AAF56753.2,REFSEQ:NP_524536,GB_protein:AAF56753; MD5=555bae13754cff3ae532c806528e2126; length=397; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • Putative odorant receptor 98a OS=Drosophila melanogaster GN=Or98a PE=3 SV=2 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=3R:join(23671672..23672432,23672490..23672847,23672908..23672982); ID=FBpp0084595; name=Or98a-PA; parent=FBgn0039551,FBtr0085226; dbxref=FlyBase:FBpp0084595,FlyBase_Annotation_IDs:CG5540-PA,GB_protein:AAF56753.2,REFSEQ:NP_524536,GB_protein:AAF56753,FlyMine:FBpp0084595,modMine:FBpp0084595; MD5=555bae13754cff3ae532c806528e2126; length=397; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=3R:join(27845950..27846710,27846768..27847125,27847186..27847260); ID=FBpp0084595; name=Or98a-PA; parent=FBgn0039551,FBtr0085226; dbxref=FlyBase:FBpp0084595,FlyBase_Annotation_IDs:CG5540-PA,GB_protein:AAF56753.2,REFSEQ:NP_524536,GB_protein:AAF56753,FlyMine:FBpp0084595,modMine:FBpp0084595; MD5=555bae13754cff3ae532c806528e2126; length=397; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=3R:join(27845950..27846710,27846768..27847125,27847186..27847260); ID=FBpp0084595; name=Or98a-PA; parent=FBgn0039551,FBtr0085226; dbxref=FlyBase:FBpp0084595,FlyBase_Annotation_IDs:CG5540-PA,GB_protein:AAF56753.2,REFSEQ:NP_524536,GB_protein:AAF56753,FlyMine:FBpp0084595,modMine:FBpp0084595; MD5=555bae13754cff3ae532c806528e2126; length=397; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • FBpp0084595 type=protein; loc=3R:join(27845950..27846710,27846768..27847125,27847186..27847260); ID=FBpp0084595; name=Or98a-PA; parent=FBgn0039551,FBtr0085226; dbxref=FlyBase:FBpp0084595,FlyBase_Annotation_IDs:CG5540-PA,GB_protein:AAF56753.2,REFSEQ:NP_524536,GB_protein:AAF56753,FlyMine:FBpp0084595,modMine:FBpp0084595; MD5=555bae13754cff3ae532c806528e2126; length=397; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=3R:join(27845950..27846710,27846768..27847125,27847186..27847260); ID=FBpp0084595; name=Or98a-PA; parent=FBgn0039551,FBtr0085226; dbxref=FlyBase:FBpp0084595,FlyBase_Annotation_IDs:CG5540-PA,GB_protein:AAF56753.2,REFSEQ:NP_524536,GB_protein:AAF56753,UniProt/Swiss-Prot:Q9VAZ3,FlyMine:FBpp0084595,modMine:FBpp0084595; MD5=555bae13754cff3ae532c806528e2126; length=397; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 397 amino acids

    Gene Ontology:
    Cellular Component: membrane [IEA]
    integral to membrane [ISS]
    Biological Process: sensory perception of smell [IEA][ISS]
    Molecular Function: odorant binding [IEA]
    olfactory receptor activity [IDA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLFNYLRKPN PTNLLTSPDS FRYFEYGMFC MGWHTPATHK IIYYITSCLI FAWCAVYLPI  60
   61 GIIISFKTDI NTFTPNELLT VMQLFFNSVG MPFKVLFFNL YISGFYKAKK LLSEMDKRCT 120
  121 TLKERVEVHQ GVVRCNKAYL IYQFIYTAYT ISTFLSAALS GKLPWRIYNP FVDFRESRSS 180
  181 FWKAALNETA LMLFAVTQTL MSDIYPLLYG LILRVHLKLL RLRVESLCTD SGKSDAENEQ 240
  241 DLIKCIKDHN LIIDYAAAIR PAVTRTIFVQ FLLIGICLGL SMINLLFFAD IWTGLATVAY 300
  301 INGLMVQTFP FCFVCDLLKK DCELLVSAIF HSNWINSSRS YKSSLRYFLK NAQKSIAFTA 360
  361 GSIFPISTGS NIKVAKLAFS VVTFVNQLNI ADRLTKN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..120] MSA 1.354997 View MSA. No confident structure predictions are available.
    2 View Details [121..237] MSA 1.396996 View MSA. No confident structure predictions are available.
    3 View Details [238..397] MSA 9.396995 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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