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Protein Overview: CG5611-PA, FBpp0...

General Information:
Name(s) found: FBpp0310721 [FlyBase]
CG5611-PA / FBpp0084569 [FlyBase]
Description(s) found:
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  • gi|7301607|gb|AAF56726.1| CG5611 [Drosophila melanogaster] [NCBI NR]
  • gi|24650670|ref|NP_651574.1| CG5611 [Drosophila melanogaster] [NCBI NR]
  • gi|113204877|gb|ABI34172.1| IP11341p [Drosophila melanogaster] [NCBI NR]
  • type=protein; loc=3R:complement(23460720..23460826,23460888..23461761); ID=FBpp0310721; name=CG5611-PC; parent=FBgn0039531,FBtr0344340; dbxref=FlyBase:FBpp0310721,FlyBase_Annotation_IDs:CG5611-PC; MD5=44e5c6f38670ef2dd9cf962a7afe3dbd; length=326; release=r5.56; species=Dmel; [FlyBase]
  • This gene is referred to in FlyBase by the symbol Dmel\CG5611 (CG5611, FBgn0039531). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:23460350..23461782. It has the cytological map location 98A12-98A13. Based on sequence similarity, it is predicted to have molecular function</span>: delta5-delta2,4-dienoyl-CoA isomerase activity. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process</span>: metabolic process. 2 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
  • >CG5611-PA translation from_gene[CG5611 CG5611 FBgn0039531] seq_release:3 mol_weight=35604 cds_boundaries:(3R:23,450,088..23,451,126[-]) aa_length:326 transcript_info:[CG5611-RA seq_release:3] gene_info:[gene symbol:CG5611 FBgn0039531 gene_boundaries:( [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q9VB17) CG5611 protein [DrosMelano7227.FASTAC.txt]
  • (AE003761) CG5611 gene product [Drosophila melanogaster] [yeastflysequest.fasta]
  • CG5611-PA [Drosophila melanogaster]gi|24650670|ref|NP_651574.1| CG5611-PA [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=3R:complement(23460720..23460826,23460888..23461761); ID=FBpp0084569; name=CG5611-PA; parent=FBgn0039531,FBtr0085199; dbxref=FlyBase:FBpp0084569,FlyBase_Annotation_IDs:CG5611-PA,GB_protein:AAF56726.1,REFSEQ:NP_651574,GB_protein:AAF56726; [fly-100309-contam.fasta]
  • CG5611-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • IP11341p [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=3R:complement(23460720..23460826,23460888..23461761); ID=FBpp0084569; name=CG5611-PA; parent=FBgn0039531,FBtr0085199; dbxref=FlyBase:FBpp0084569,FlyBase_Annotation_IDs:CG5611-PA,GB_protein:AAF56726.1,REFSEQ:NP_651574,GB_protein:AAF56726; MD5=44e5c6f38670ef2dd9cf962a7afe3dbd; length=326; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=3R:complement(23460720..23460826,23460888..23461761); ID=FBpp0084569; name=CG5611-PA; parent=FBgn0039531,FBtr0085199; dbxref=FlyBase:FBpp0084569,FlyBase_Annotation_IDs:CG5611-PA,GB_protein:AAF56726.1,REFSEQ:NP_651574,GB_protein:AAF56726; MD5=44e5c6f38670ef2dd9cf962a7afe3dbd; length=326; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • CG5611 OS=Drosophila melanogaster GN=CG5611 PE=1 SV=1 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=3R:complement(23460720..23460826,23460888..23461761); ID=FBpp0084569; name=CG5611-PA; parent=FBgn0039531,FBtr0085199; dbxref=FlyBase:FBpp0084569,FlyBase_Annotation_IDs:CG5611-PA,GB_protein:AAF56726.1,REFSEQ:NP_651574,GB_protein:AAF56726,FlyMine:FBpp0084569,modMine:FBpp0084569; MD5=44e5c6f38670ef2dd9cf962a7afe3dbd; length=326; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • CG5611 OS=Drosophila melanogaster GN=CG5611 PE=2 SV=1 [UniProt_D_Melanogaster_07132012_07-13-2012_reversed.fasta]
  • type=protein; loc=3R:complement(join(27635166..27636039,27634998..27635104)); ID=FBpp0084569; name=CG5611-PA; parent=FBgn0039531,FBtr0085199; dbxref=FlyBase:FBpp0084569,FlyBase_Annotation_IDs:CG5611-PA,GB_protein:AAF56726.1,REFSEQ:NP_651574,GB_protein:AAF56726,FlyMine:FBpp0084569,modMine:FBpp0084569; MD5=44e5c6f38670ef2dd9cf962a7afe3dbd; length=326; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=3R:complement(join(27635166..27636039,27634998..27635104)); ID=FBpp0310721; name=CG5611-PC; parent=FBgn0039531,FBtr0344340; dbxref=GB_protein:AGB96396,REFSEQ:NP_001263016,FlyBase:FBpp0310721,FlyBase_Annotation_IDs:CG5611-PC; MD5=44e5c6f38670ef2dd9cf962a7afe3dbd; length=326; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=3R:complement(join(27635166..27636039,27634998..27635104)); ID=FBpp0084569; name=CG5611-PA; parent=FBgn0039531,FBtr0085199; dbxref=FlyBase:FBpp0084569,FlyBase_Annotation_IDs:CG5611-PA,GB_protein:AAF56726.1,REFSEQ:NP_651574,GB_protein:AAF56726,FlyMine:FBpp0084569,modMine:FBpp0084569; MD5=44e5c6f38670ef2dd9cf962a7afe3dbd; length=326; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • type=protein; loc=3R:complement(join(27635166..27636039,27634998..27635104)); ID=FBpp0310721; name=CG5611-PC; parent=FBgn0039531,FBtr0344340; dbxref=GB_protein:AGB96396,REFSEQ:NP_001263016,FlyBase:FBpp0310721,FlyBase_Annotation_IDs:CG5611-PC; MD5=44e5c6f38670ef2dd9cf962a7afe3dbd; length=326; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • CG5611, isoform A OS=Drosophila melanogaster GN=CG5611 PE=2 SV=1 [DROME.fasta.20160308]
  • FBpp0084569 type=protein; loc=3R:complement(join(27635166..27636039,27634998..27635104)); ID=FBpp0084569; name=CG5611-PA; parent=FBgn0039531,FBtr0085199; dbxref=FlyBase:FBpp0084569,FlyBase_Annotation_IDs:CG5611-PA,GB_protein:AAF56726.1,REFSEQ:NP_651574,GB_protein:AAF56726,FlyMine:FBpp0084569,modMine:FBpp0084569; MD5=44e5c6f38670ef2dd9cf962a7afe3dbd; length=326; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • FBpp0310721 type=protein; loc=3R:complement(join(27635166..27636039,27634998..27635104)); ID=FBpp0310721; name=CG5611-PC; parent=FBgn0039531,FBtr0344340; dbxref=GB_protein:AGB96396,REFSEQ:NP_001263016,FlyBase:FBpp0310721,FlyBase_Annotation_IDs:CG5611-PC; MD5=44e5c6f38670ef2dd9cf962a7afe3dbd; length=326; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=3R:complement(join(27635166..27636039,27634998..27635104)); ID=FBpp0084569; name=CG5611-PA; parent=FBgn0039531,FBtr0085199; dbxref=FlyBase:FBpp0084569,FlyBase_Annotation_IDs:CG5611-PA,GB_protein:AAF56726.1,REFSEQ:NP_651574,GB_protein:AAF56726,UniProt/TrEMBL:Q9VB17,FlyMine:FBpp0084569,modMine:FBpp0084569; MD5=44e5c6f38670ef2dd9cf962a7afe3dbd; length=326; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
  • type=protein; loc=3R:complement(join(27635166..27636039,27634998..27635104)); ID=FBpp0310721; name=CG5611-PC; parent=FBgn0039531,FBtr0344340; dbxref=GB_protein:AGB96396,REFSEQ:NP_001263016,FlyBase:FBpp0310721,FlyBase_Annotation_IDs:CG5611-PC,UniProt/TrEMBL:Q9VB17; MD5=44e5c6f38670ef2dd9cf962a7afe3dbd; length=326; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 326 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: metabolic process [IEA]
    Molecular Function: delta5-delta2,4-dienoyl-CoA isomerase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRFVYKLLQ SANQTSSGCR RISLATVRNA ESESQEGAPA RTVLVEKDSH ITLIGLNREQ  60
   61 QRNSIDANTA EQLTEAISQF EADDTSPVGV LYGIGGSFCA GYDLEELEAE AQRGSLNFLL 120
  121 RHEGSVGPTR RHLRKPLVCG ISGFCVAGGL ELALMCDLRV MEDTAVLGFF NRRLGVPLSD 180
  181 GGTVRLAAAV GYSNALEIIA TGRRIYSGEA RRIGLVNRVV ATGTALGQAV NLAFSIAKFP 240
  241 MASLMHDRNA VLENANAYNK PGFHVASYNE IMNVTSDMIT DMQEGVKRFK NSEIKGPKTD 300
  301 SWSIKEKTIP DWEKAEIEIE KQKQKT

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..326] PSI-BLAST 77.30103 No description for 2hw5A was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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