YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CG5611-PA, FBpp0...
Protein type:	Transmembrane
Type Confidence:	0.62
Topology Confidence:	0.54
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRFVYKLLQ SANQTSSGCR RISLATVRNA ESESQEGAPA RTVLVEKDSH ITLIGLNREQ  60
   61 QRNSIDANTA EQLTEAISQF EADDTSPVGV LYGIGGSFCA GYDLEELEAE AQRGSLNFLL 120
  121 RHEGSVGPTR RHLRKPLVCG ISGFCVAGGL ELALMCDLRV MEDTAVLGFF NRRLGVPLSD 180
  181 GGTVRLAAAV GYSNALEIIA TGRRIYSGEA RRIGLVNRVV ATGTALGQAV NLAFSIAKFP 240
  241 MASLMHDRNA VLENANAYNK PGFHVASYNE IMNVTSDMIT DMQEGVKRFK NSEIKGPKTD 300
  301 SWSIKEKTIP DWEKAEIEIE KQKQKT

Type	Start	End	Confidence
Cytoplasmic	1	136	0.59
Transmembrane Helix	137	155	0.54
Non-Cytoplasmic	156	326	0.71