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Protein Overview: mrt-PA, FBpp0297...

General Information:
Name(s) found: FBpp0297117 [FlyBase]
FBpp0297116 [FlyBase]
FBpp0297115 [FlyBase]
FBpp0297114 [FlyBase]
FBpp0297113 [FlyBase]
mrt-PA / FBpp0084544 [FlyBase]
Description(s) found:
Found 52 descriptions.
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  • type=protein; loc=3R:complement(23103312..23104825,23104900..23105713); ID=FBpp0297117; name=mrt-PF; parent=FBgn0039507,FBtr0305975; dbxref=REFSEQ:NP_001247331,GB_protein:AFH06648,FlyBase:FBpp0297117,FlyBase_Annotation_IDs:CG3361-PF; MD5=cc9e29754c27614f01ccb1682f379a25; length=775; release=r5.56; species=Dmel; [FlyBase]
  • type=protein; loc=3R:complement(23103312..23104825,23104900..23105713); ID=FBpp0297116; name=mrt-PE; parent=FBgn0039507,FBtr0305974; dbxref=REFSEQ:NP_001247330,GB_protein:AFH06647,FlyBase:FBpp0297116,FlyBase_Annotation_IDs:CG3361-PE; MD5=cc9e29754c27614f01ccb1682f379a25; length=775; release=r5.56; species=Dmel; [FlyBase]
  • type=protein; loc=3R:complement(23103312..23104825,23104900..23105713); ID=FBpp0297115; name=mrt-PD; parent=FBgn0039507,FBtr0305973; dbxref=REFSEQ:NP_001247329,GB_protein:AFH06646,FlyBase:FBpp0297115,FlyBase_Annotation_IDs:CG3361-PD; MD5=cc9e29754c27614f01ccb1682f379a25; length=775; release=r5.56; species=Dmel; [FlyBase]
  • type=protein; loc=3R:complement(23103312..23104825,23104900..23105713); ID=FBpp0297114; name=mrt-PC; parent=FBgn0039507,FBtr0305972; dbxref=REFSEQ:NP_001247328,GB_protein:AFH06645,FlyBase:FBpp0297114,FlyBase_Annotation_IDs:CG3361-PC; MD5=cc9e29754c27614f01ccb1682f379a25; length=775; release=r5.56; species=Dmel; [FlyBase]
  • type=protein; loc=3R:complement(23103312..23104825,23104900..23105713); ID=FBpp0297113; name=mrt-PB; parent=FBgn0039507,FBtr0305971; dbxref=REFSEQ:NP_001247327,GB_protein:AFH06644,FlyBase:FBpp0297113,FlyBase_Annotation_IDs:CG3361-PB; MD5=cc9e29754c27614f01ccb1682f379a25; length=775; release=r5.56; species=Dmel; [FlyBase]
  • The gene martik is referred to in FlyBase by the symbol Dmel\mrt (CG3361, FBgn0039507). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:23102971..23107566. It has the cytological map location 97F1. Its molecular function is unknown. There is experimental evidence that it is involved in the biological process</span>: olfactory learning; learning or memory. 9 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 775 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: olfactory learning [IMP]
    learning or memory [IMP]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLMPRYLDSS TSSGSHGAAG ATNSSSSPPT TVAAHTKMRL LSKVEHNMRQ SQGHIQSNQS  60
   61 NASGQDINHL LHTASTGNGV VDDVDGLLTP MRIKAHMSPP YSAGSSVKSD SLGYSPRPER 120
  121 NLWSRAEMLE MLSIMQNLNA LEQLNDRNMK SEQVFRQIEE VMRSKGFVKK SSIQIWTKWK 180
  181 FLKSTYNTTT RHGTGVPKVV PEEVYRVLCR MLSDTNHGGG NSNVNGSLSE CGNSMDSSKT 240
  241 AGDDNKEDIL GVEHPIFGFR LGPIKPEPID IGYETTEKHD MVSEPDMESF DYEAGSSHAD 300
  301 NGDQEDVPHL PFIVSVKHEP DVDLGMDTTN TPPPTAPASP SPPPVTVDDT EDDSVYSSTP 360
  361 VAPPPLRVAS FAKGELRRPT HGILQIDRPP PTLTKMGQQQ IPNPGQMSRS VPLQSTSSIN 420
  421 FVHPHSKLML PRRQNPNSSQ SGLRLPRDIS VQSTGMRMKT VPMRDTGYSL RPDRMTHDID 480
  481 QSTSSPPQSP STMSSLLGRG PPPKYQIAGQ QAGASTSRQA HMMSSHQLTP VQHQQLQPRK 540
  541 RRLGQSPVMG MPVPVKLQRS SNMYGSAPKD IRSHPAVGEE SKKKSSEEET KQRRKRQDEL 600
  601 LAKELSQLAS AMRTAQKEML QDFFLQQKEI ARREHVFQMK QDSLVMRTLR RQTDALLRTA 660
  661 NELVSGVSEA AKMEPDDKEG VIPETQMPFE PETELQTPES EEDNENGEGY AGDDVQETME 720
  721 EPDYEDNEDD DYEHDEDEED EGDYDENMAN DSDLEMSNLA MSEGSNNAEI ISGGH

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..248] deduced N/A No confident structure predictions are available.
    2 View Details [249..511] MSA 1.23299 View MSA. No confident structure predictions are available.
    3 View Details [512..628] MSA 5.237997 View MSA. No confident structure predictions are available.
    4 View Details [629..775] MSA 1.190997 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.71

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle