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Protein Overview: CG5053-PA

General Information:
Name(s) found: CG5053-PA / FBpp0084272 [FlyBase]
Description(s) found:
Found 22 descriptions.
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  • This gene is referred to in FlyBase by the symbol Dmel\CG5053 (CG5053, FBgn0039352). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:21487522..21491366. It has the cytological map location 96E8. Its molecular function is unknown. There is experimental evidence that it is involved in the biological process</span>: dsRNA transport. 3 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 607 amino acids

    Gene Ontology:
    Cellular Component: adherens junction [IDA]
    Biological Process: negative regulation of multicellular organism growth [IMP]
    signal transduction [IEA]
    compound eye development [IMP]
    dsRNA transport [IMP]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MELKVWVEGI QRIVCGVTVN TTCQDVVFAL AHATGKVGRF TLIERWRNNE RHLAPNENPM  60
   61 KLLLKWGEYA NDVQFILQRS ENKTQQQQQQ QQQQQQNNNN NNNYAVMTTT KKPLGPNNNN 120
  121 NNKPAPTLLK QKSNVELSYR TKELKKSFGG HDAKQFDNIG IVKGIPQQQQ LQSQQTAMGA 180
  181 PASPPQEQLT PQDNNNVAPL VPKHEKSLSN PLDMTSTGSN PPAPTNGYND FYNNNSSSNQ 240
  241 HIYSQLSKSS NELRRSSPNE MYYNNNNNIV NNNNNSPELY KQTPTISANG ALVPPPYRDP 300
  301 PPPRNSPMCQ GQRLASSNAD TMSNASSSTN PFLSDYDQHS SHNTNSINNN SQAMEEGEPM 360
  361 FQTTQYNDLL QLIKFQREKI TAQQMELQKF DTEIVYLESK ERDHAHELDA ISREISKADQ 420
  421 IFRQGSEQLQ TLQYVEEENE LVKQQEKTLK SEIALLRSKL ANCETELLQC KNKMRLLMDD 480
  481 IELEQQHQQQ TNRQTVERDF LMEMERIQSE IDQALHNTDT SNKTADSLKK ELLMIEHAIA 540
  541 DKKRQVEQLV NEMKEVNLQS LTVTTTEEIK HLLEGPNKQG SSRRIIGSPR QLETAVPTSK 600
  601 NPHGVWV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..83] PSI-BLAST 34.154902 Solution structure of N-terminal domain of chromosome 12 open reading frame 2
    2 View Details [84..255] deduced N/A No confident structure predictions are available.
    3 View Details [256..607] PSI-BLAST 15.522879 Heavy meromyosin subfragment


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle