| Protein: | CG5053-PA |
| Organism: | Drosophila melanogaster |
| Length: | 607 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG5053-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
250.0 | [0..49] | [601..2136] |
|
Region A: Residues: [1-83] |
1 11 21 31 41 51
| | | | | |
1 MELKVWVEGI QRIVCGVTVN TTCQDVVFAL AHATGKVGRF TLIERWRNNE RHLAPNENPM 60
61 KLLLKWGEYA NDVQFILQRS ENK
|
| Detection Method: |  |
| Confidence: | 34.154902 |
| Match: | 2cs4A |
| Description: | Solution structure of N-terminal domain of chromosome 12 open reading frame 2 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [84-255] |
1 11 21 31 41 51
| | | | | |
1 TQQQQQQQQQ QQQNNNNNNN YAVMTTTKKP LGPNNNNNNK PAPTLLKQKS NVELSYRTKE 60
61 LKKSFGGHDA KQFDNIGIVK GIPQQQQLQS QQTAMGAPAS PPQEQLTPQD NNNVAPLVPK 120
121 HEKSLSNPLD MTSTGSNPPA PTNGYNDFYN NNSSSNQHIY SQLSKSSNEL RR
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [256-607] |
1 11 21 31 41 51
| | | | | |
1 SSPNEMYYNN NNNIVNNNNN SPELYKQTPT ISANGALVPP PYRDPPPPRN SPMCQGQRLA 60
61 SSNADTMSNA SSSTNPFLSD YDQHSSHNTN SINNNSQAME EGEPMFQTTQ YNDLLQLIKF 120
121 QREKITAQQM ELQKFDTEIV YLESKERDHA HELDAISREI SKADQIFRQG SEQLQTLQYV 180
181 EEENELVKQQ EKTLKSEIAL LRSKLANCET ELLQCKNKMR LLMDDIELEQ QHQQQTNRQT 240
241 VERDFLMEME RIQSEIDQAL HNTDTSNKTA DSLKKELLMI EHAIADKKRQ VEQLVNEMKE 300
301 VNLQSLTVTT TEEIKHLLEG PNKQGSSRRI IGSPRQLETA VPTSKNPHGV WV
|
| Detection Method: | |
| Confidence: | 15.522879 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
